RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 LINS1Q8NG48 757 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
MARK3-213ENST00000558611 HAUS7Q99871 368 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 COL4A5P29400 1685 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 EPHX1P07099 455 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
MARK3-213ENST00000558611 GBP1P32455 592 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 NTF4P34130 210 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 CD68P34810 354 aaPredicted RBP12.14□□□□□ -0.47
MARK3-213ENST00000558611 CAP2P40123 477 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 PPP2R2AP63151 447 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 GRAPQ13588 217 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 GCKRQ14397 625 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
MARK3-213ENST00000558611 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
MARK3-213ENST00000558611 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
MARK3-213ENST00000558611 PSMD1Q99460 953 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.14□□□□□ -0.47
MARK3-213ENST00000558611 LRP2BPQ9P2M1 347 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
MARK3-213ENST00000558611 CLEC3AO75596 197 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 BBOX1O75936 387 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 FGFR1P11362 822 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 FMNL3Q8IVF7 1028 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 SSH1Q8WYL5 1049 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
MARK3-213ENST00000558611 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
MARK3-213ENST00000558611 PTPRCP08575 1304 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
MARK3-213ENST00000558611 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
MARK3-213ENST00000558611 CTSWP56202 376 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 SUMO1P63165 101 aaKnown RBP12.12□□□□□ -0.47
MARK3-213ENST00000558611 MAP7Q14244 749 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 C8orf86Q6ZUL3 223 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 GPR161Q8N6U8 529 aaKnown RBP12.12□□□□□ -0.47
MARK3-213ENST00000558611 CYB5D2Q8WUJ1 264 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 ZNF277Q9NRM2 450 aaPredicted RBP12.12□□□□□ -0.47
MARK3-213ENST00000558611 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
MARK3-213ENST00000558611 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 RTL9Q8NET4 1388 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 C9IYK1 514 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 CAPNS1P04632 268 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 YOD1Q5VVQ6 348 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 ZNF227Q86WZ6 799 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 LRRN4CLQ8ND94 238 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 ATXN3LQ9H3M9 355 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
MARK3-213ENST00000558611 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
MARK3-213ENST00000558611 ITGAVP06756 1048 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 SRSF11Q05519 484 aaKnown RBP12.1□□□□□ -0.47
MARK3-213ENST00000558611 ANKRD39Q53RE8 183 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 TRIM61Q5EBN2 209 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
MARK3-213ENST00000558611 WWC2Q6AWC2 1192 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 CHSY3Q70JA7 882 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 NPAS3Q8IXF0 933 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 TARS2Q9BW92 718 aaKnown RBP12.1□□□□□ -0.47
MARK3-213ENST00000558611 PLA2G12BQ9BX93 195 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 TMPRSS13Q9BYE2 586 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 FAM86C1Q9NVL1 165 aa12.1□□□□□ -0.47
MARK3-213ENST00000558611 GLTPD2A6NH11 291 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 ALDH1L1O75891 902 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 DPP8Q6V1X1 898 aaPredicted RBP12.09□□□□□ -0.47
MARK3-213ENST00000558611 CDC37L1Q7L3B6 337 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 DTWD1Q8N5C7 304 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
MARK3-213ENST00000558611 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 GEMIN8Q9NWZ8 242 aaKnown RBP12.09□□□□□ -0.47
MARK3-213ENST00000558611 KCNK4Q9NYG8 393 aa12.09□□□□□ -0.47
MARK3-213ENST00000558611 MYH13Q9UKX3 1938 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 MEGF11A6BM72 1044 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
MARK3-213ENST00000558611 GRM8O00222 908 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms