RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ATP2A2P16615 1042 aaKnown RBP13.68□□□□□ -0.22
HERC1-202ENST00000558324 CDC27P30260 824 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 METAP2P50579 478 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERC1-202ENST00000558324 HIC1Q14526 733 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 Q6ZUG5 572 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 AFAP1L1Q8TED9 768 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 BRF1Q92994 677 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 WNT8BQ93098 351 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 GPR20Q99678 358 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 TUT1Q9H6E5 874 aaKnown RBP13.68□□□□□ -0.22
HERC1-202ENST00000558324 PCDHA6Q9UN73 950 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 PCDHA8Q9Y5H6 950 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 CKBP12277 381 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 ITGB5P18084 799 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 ADCY7P51828 1080 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 FUT2Q10981 343 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 KCNB2Q92953 911 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
HERC1-202ENST00000558324 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
HERC1-202ENST00000558324 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 C17orf102A2RUQ5 167 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 STXBP3O00186 592 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 ATP9AO75110 1047 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
HERC1-202ENST00000558324 PTK7Q13308 1070 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 MTMR1Q13613 665 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 USP26Q9BXU7 913 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
HERC1-202ENST00000558324 SMCO2A6NFE2 343 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 NBNO60934 754 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 KCNA2P16389 499 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 TCF7P36402 384 aaPredicted RBP13.65□□□□□ -0.22
HERC1-202ENST00000558324 THPOP40225 353 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 RBL2Q08999 1139 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 GPNMBQ14956 572 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
HERC1-202ENST00000558324 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
HERC1-202ENST00000558324 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
HERC1-202ENST00000558324 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 CDHR1Q96JP9 859 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
HERC1-202ENST00000558324 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 SETD4Q9NVD3 440 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 BARHL2Q9NY43 387 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
HERC1-202ENST00000558324 PCDHA11Q9Y5I1 949 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 UBIAD1Q9Y5Z9 338 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 GBF1Q92538 1859 aa13.65□□□□□ -0.22
HERC1-202ENST00000558324 TREHO43280 583 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 CTSHP09668 335 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 MARK3P27448 753 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 KCNJ6P48051 423 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 RCAN1P53805 252 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
HERC1-202ENST00000558324 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 ANO3Q9BYT9 981 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
HERC1-202ENST00000558324 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 DLL1O00548 723 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 CA3P07451 260 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 SCG2P13521 617 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 IGFBP4P22692 258 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 PSMA5P28066 241 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 WDR5P61964 334 aaKnown RBP13.63□□□□□ -0.23
HERC1-202ENST00000558324 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
HERC1-202ENST00000558324 ARHGAP4P98171 946 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 MBTPS1Q14703 1052 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
HERC1-202ENST00000558324 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 CNKSR3Q6P9H4 555 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 TRAF7Q6Q0C0 670 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 HERC6Q8IVU3 1022 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
HERC1-202ENST00000558324 CYP2W1Q8TAV3 490 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 PPM1EQ8WY54 764 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 GLG1Q92896 1179 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 PHKBQ93100 1093 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 EYSQ5T1H1 3165 aa13.63□□□□□ -0.23
HERC1-202ENST00000558324 GSTTP1A0A1W2PQM5 241 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms