RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 CYBBP04839 570 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 KCNA6P17658 529 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 VIPR1P32241 457 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 RHBDL3P58872 404 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 SERINC3Q13530 473 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 KIR3DS1Q14943 382 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 SV2CQ496J9 727 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 ODR4Q5SWX8 454 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 CCSAPQ6IQ19 270 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 ZC3H14Q6PJT7 736 aaKnown RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 EEPD1Q7L9B9 569 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 TMC6Q7Z403 805 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 ZNF408Q9H9D4 720 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 DBR1Q9UK59 544 aaKnown RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 CNOT6Q9ULM6 557 aaKnown RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 EMC9Q9Y3B6 208 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 IRAK3Q9Y616 596 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 PLXNC1O60486 1568 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 KDM5DQ9BY66 1539 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 PZPP20742 1482 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 CLIP1P30622 1438 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 SRGAP3O43295 1099 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 CDC45O75419 566 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 KRT1P04264 644 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 PDGFRBP09619 1106 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 TACR1P25103 407 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 YY1P25490 414 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 CFPP27918 469 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 ETFBP38117 255 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 MAPKAPK2P49137 400 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 MVKQ03426 396 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 BIRC2Q13490 618 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 ZNF385BQ569K4 471 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 PAQR3Q6TCH7 311 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 RPTNQ6XPR3 784 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 FMNL3Q8IVF7 1028 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 LZTR1Q8N653 840 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 NLGN2Q8NFZ4 835 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 USP33Q8TEY7 942 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 PNISRQ8TF01 805 aaKnown RBP5.31□□□□□ -1.56
LRRC28-205ENST00000558248 SIGLEC10Q96LC7 697 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 CEP89Q96ST8 783 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 MCMBPQ9BTE3 642 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 SGPP1Q9BX95 441 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-205ENST00000558248 ATP7AQ04656 1500 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 FGD6Q6ZV73 1430 aa5.31□□□□□ -1.56
LRRC28-205ENST00000558248 COL16A1Q07092 1604 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-205ENST00000558248 N4BP3O15049 544 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 SUSD5O60279 629 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 NPHS1O60500 1241 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 SCRN1Q12765 414 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 CBX2Q14781 532 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-205ENST00000558248 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-205ENST00000558248 GTF2IRD2BQ6EKJ0 949 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 GTF2IRD2Q86UP8 949 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 TMEM151BQ8IW70 566 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 TRIM59Q8IWR1 403 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 STAG1Q8WVM7 1258 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 C8orf48Q96LL4 319 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 RPS6KC1Q96S38 1066 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 EPN3Q9H201 632 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 CYP26B1Q9NR63 512 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 KLHL14Q9P2G3 628 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 SCAF11Q99590 1463 aaKnown RBP5.3□□□□□ -1.56
LRRC28-205ENST00000558248 PREX2Q70Z35 1606 aa5.3□□□□□ -1.56
LRRC28-205ENST00000558248 MAP3K1Q13233 1512 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 LRRC9Q6ZRR7 1453 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 B2RBV5 119 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 DBHP09172 617 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 MSL3P1P0C860 447 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 ZSCAN22P10073 491 aaPredicted RBP5.29□□□□□ -1.56
LRRC28-205ENST00000558248 PFKLP17858 780 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 FAM50AQ14320 339 aaKnown RBP5.29□□□□□ -1.56
LRRC28-205ENST00000558248 ZFYVE27Q5T4F4 411 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 IQCEQ6IPM2 695 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 ANKS3Q6ZW76 656 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 CPNE8Q86YQ8 564 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 SIAH1Q8IUQ4 282 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 TMTC2Q8N394 836 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 ZNF513Q8N8E2 541 aaPredicted RBP5.29□□□□□ -1.56
LRRC28-205ENST00000558248 MZB1Q8WU39 189 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 SGSM3Q96HU1 749 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
LRRC28-205ENST00000558248 NKX2-4Q9H2Z4 354 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 GCM1Q9NP62 436 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 SIRPGQ9P1W8 387 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 KCTD3Q9Y597 815 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 EID1Q9Y6B2 187 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 MSH6P52701 1360 aa5.29□□□□□ -1.56
LRRC28-205ENST00000558248 DHX29Q7Z478 1369 aaKnown RBP5.29□□□□□ -1.56
LRRC28-205ENST00000558248 SYCP2Q9BX26 1530 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 A0A0U1RQG5 324 aaPredicted RBP5.28□□□□□ -1.56
LRRC28-205ENST00000558248 F8W031 263 aaPredicted RBP5.28□□□□□ -1.56
LRRC28-205ENST00000558248 MYO1BO43795 1136 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 PLIN1O60240 522 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms