RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ACAD11Q709F0 780 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 SMYD4Q8IYR2 804 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 DNAJB8Q8NHS0 232 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 DCAF11Q8TEB1 546 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 ZDHHC15Q96MV8 337 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 MIPEPQ99797 713 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 NKX2-4Q9H2Z4 354 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 ARNT2Q9HBZ2 717 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 RNF112Q9ULX5 631 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 DIS3Q9Y2L1 958 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 FHOD1Q9Y613 1164 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 PIK3C2BO00750 1634 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
MTHFD1-216ENST00000557539 TRPM2O94759 1503 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 IGSF1Q8N6C5 1336 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 ADGRL2O95490 1459 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 PXDNQ92626 1479 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 FYCO1Q9BQS8 1478 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 M0R2C6 588 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 ZEB2O60315 1214 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 VAMP4O75379 141 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 GLB1P16278 677 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 FSTP19883 344 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 NBPF9Q3BBW0 867 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 SYCP2LQ5T4T6 812 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 KSR2Q6VAB6 950 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 CDH24Q86UP0 819 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 ARMC10Q8N2F6 343 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 NXPE1Q8N323 547 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 C12orf50Q8NA57 414 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 SMG8Q8ND04 991 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 MPHOSPH6Q99547 160 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 P2RX7Q99572 595 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 RNF208Q9H0X6 261 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 GPR55Q9Y2T6 319 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
MTHFD1-216ENST00000557539 CASP8AP2Q9UKL3 1982 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 TNKSO95271 1327 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 WDR33Q9C0J8 1336 aaKnown RBP6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 AQP7O14520 342 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 PRPF3O43395 683 aaKnown RBP6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 CPP00450 1065 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 ZSCAN20P17040 1043 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 IL2P60568 153 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 AMPD2Q01433 879 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 GUCY1A3Q02108 690 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 GRB10Q13322 594 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 KCTD2Q14681 263 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 SLC35F1Q5T1Q4 408 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 ARHGAP27Q6ZUM4 889 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 TCEAL8Q8IYN2 117 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 C1orf159Q96HA4 380 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 DSCC1Q9BVC3 393 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 PRDM14Q9GZV8 571 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 CYP26B1Q9NR63 512 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 FAM105AQ9NUU6 356 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 GFOD1Q9NXC2 390 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 PCOLCE2Q9UKZ9 415 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 SPEF1Q9Y4P9 236 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 ACTL7BQ9Y614 415 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 TOPAZ1Q8N9V7 1692 aa6.29□□□□□ -1.4
MTHFD1-216ENST00000557539 SPATA31A1Q5TZJ5 1347 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 GOLGA6CA6NDK9 693 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 GOLGA6BA6NDN3 693 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 PRKD3O94806 890 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 FBXO21O94952 628 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 SCG5P05408 212 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 GOLGA6DP0CG33 693 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 HLTFQ14527 1009 aaKnown RBP eCLIP6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 BRD3Q15059 726 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 PTPN21Q16825 1174 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 ZNF827Q17R98 1081 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 ABCB5Q2M3G0 1257 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 IQSEC1Q6DN90 963 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 MTDHQ86UE4 582 aaKnown RBP6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 DCAF4Q8WV16 495 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 JPH3Q8WXH2 748 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms