RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
TRAV33-201ENST00000557514 CTSHP09668 335 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 FRMD5Q7Z6J6 570 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 ADSSL1Q8N142 457 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 RPGRIP1Q96KN7 1286 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 RIPOR3Q96MK2 946 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 PLAGL2Q9UPG8 496 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
TRAV33-201ENST00000557514 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
TRAV33-201ENST00000557514 CHD8Q9HCK8 2581 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
TRAV33-201ENST00000557514 APPP05067 770 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 DNAJB1P25685 340 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 TMEM105Q8N8V8 129 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
TRAV33-201ENST00000557514 P2RX5Q93086 422 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 MAF1Q9H063 256 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
TRAV33-201ENST00000557514 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
TRAV33-201ENST00000557514 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 RNF113AO15541 343 aaKnown RBP12.2□□□□□ -0.46
TRAV33-201ENST00000557514 PPFIA4O75335 1185 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 KRT37O76014 449 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
TRAV33-201ENST00000557514 NRIP1P48552 1158 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 STXBP2Q15833 593 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 SIRT2Q8IXJ6 389 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
TRAV33-201ENST00000557514 ATP6V0A1Q93050 837 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 ZNF689Q96CS4 500 aaPredicted RBP12.2□□□□□ -0.46
TRAV33-201ENST00000557514 IWS1Q96ST2 819 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 C16orf70Q9BSU1 422 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 NAPBQ9H115 298 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 MRVI1Q9Y6F6 885 aa12.2□□□□□ -0.46
TRAV33-201ENST00000557514 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 TREHO43280 583 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 HMMRO75330 724 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 ITGB1P05556 798 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 PDHBP11177 359 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
TRAV33-201ENST00000557514 HSDL1Q3SXM5 330 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 SPPL3Q8TCT6 385 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 RMDN1Q96DB5 314 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
TRAV33-201ENST00000557514 FOXP2O15409 715 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 SMIM10L2AP0DMW4 78 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 SMIM10L2BP0DMW5 78 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
TRAV33-201ENST00000557514 ZNF543Q08ER8 600 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 USH1GQ495M9 461 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 FAM26DQ5JW98 314 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 VN1R2Q8NFZ6 395 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 RMDN3Q96TC7 470 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
TRAV33-201ENST00000557514 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
TRAV33-201ENST00000557514 ORC4O43929 436 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
TRAV33-201ENST00000557514 DGKIO75912 1065 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
TRAV33-201ENST00000557514 DGLUCYQ7Z3D6 616 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
TRAV33-201ENST00000557514 KREMEN2Q8NCW0 462 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 POF1BQ8WVV4 589 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 TMEM47Q9BQJ4 181 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
TRAV33-201ENST00000557514 MYH7P12883 1935 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 H3BRB1 525 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 GHRP10912 638 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 ZBTB33Q86T24 672 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 RBM23Q86U06 439 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
TRAV33-201ENST00000557514 EHMT1Q9H9B1 1298 aa12.16□□□□□ -0.46
TRAV33-201ENST00000557514 ABCB11O95342 1321 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 NLRC5Q86WI3 1866 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms