RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PPP2CBP62714 309 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 PPP2R2AP63151 447 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 PPP2CAP67775 309 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 TMC5Q6UXY8 1006 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 SPRED1Q7Z699 444 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 KBTBD2Q8IY47 623 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 KLHL36Q8N4N3 616 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 SLC16A11Q8NCK7 471 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 TTLL11Q8NHH1 800 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 KISS1RQ969F8 398 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-216ENST00000557496 KLC2Q9H0B6 622 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 MEGF9Q9H1U4 602 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 SLC6A20Q9NP91 592 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 RBPJLQ9UBG7 517 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 FTSJ1Q9UET6 329 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 SRRDQ9UH36 339 aa4.34□□□□□ -1.71
FOXN3-216ENST00000557496 NPEPPSL1A6NEC2 478 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 KRIT1O00522 736 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 MSCO60682 206 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 FGRP09769 529 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 C6P13671 934 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 TACR2P21452 398 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 TRMT10BQ6PF06 316 aaKnown RBP4.33□□□□□ -1.72
FOXN3-216ENST00000557496 ARHGEF18Q6ZSZ5 1173 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 CIR1Q86X95 450 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-216ENST00000557496 VPS37DQ86XT2 251 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 Q8N1X5 172 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 DTX3Q8N9I9 347 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 PIP4K2CQ8TBX8 421 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 SH3RF3Q8TEJ3 882 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-216ENST00000557496 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 ZNF408Q9H9D4 720 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 GPR27Q9NS67 375 aa4.33□□□□□ -1.72
FOXN3-216ENST00000557496 A0A1W2PQU0 124 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 AGRPO00253 132 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 KLHL18O94889 574 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 FSHBP01225 129 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 NFATC3Q12968 1075 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 R3HDM1Q15032 1099 aaKnown RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 SLFN13Q68D06 897 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 CRIP3Q6Q6R5 217 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 RSPO2Q6UXX9 243 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 TRIM48Q8IWZ4 208 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 NUDT10Q8NFP7 164 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 CLEC4DQ8WXI8 215 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 NUDT11Q96G61 164 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 CDK5RAP1Q96SZ6 601 aaKnown RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 PTPN18Q99952 460 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 IER2Q9BTL4 223 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 JAM3Q9BX67 310 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 SCAND2PQ9GZW5 306 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 BARX1Q9HBU1 254 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 DLL4Q9NR61 685 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 PPARGC1AQ9UBK2 798 aaKnown RBP4.32□□□□□ -1.72
FOXN3-216ENST00000557496 ADAM29Q9UKF5 820 aa4.32□□□□□ -1.72
FOXN3-216ENST00000557496 SLC27A2O14975 620 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 DLX3O60479 287 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 ERCC5P28715 1186 aaPredicted RBP4.31□□□□□ -1.72
FOXN3-216ENST00000557496 SELENOPP49908 381 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 VASNQ6EMK4 673 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 ZNF585AQ6P3V2 769 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 OTOP3Q7RTS5 596 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 SORCS2Q96PQ0 1159 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 PHF20Q9BVI0 1012 aa4.31□□□□□ -1.72
FOXN3-216ENST00000557496 PDGFDQ9GZP0 370 aaPredicted RBP4.31□□□□□ -1.72
FOXN3-216ENST00000557496 B4GALT4O60513 344 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 KNG1P01042 644 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 CHGBP05060 677 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 GRK2P25098 689 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 GRK3P35626 688 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 GRIN1Q05586 938 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 GNL2Q13823 731 aaKnown RBP4.3□□□□□ -1.72
FOXN3-216ENST00000557496 SMAD2Q15796 467 aaKnown RBP4.3□□□□□ -1.72
FOXN3-216ENST00000557496 HABP4Q5JVS0 413 aaKnown RBP4.3□□□□□ -1.72
FOXN3-216ENST00000557496 PHF19Q5T6S3 580 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 USP53Q70EK8 1073 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 RALYLQ86SE5 291 aaKnown RBP4.3□□□□□ -1.72
FOXN3-216ENST00000557496 PALM2Q8IXS6 379 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 CELF2-AS1Q8N7Q2 184 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 UHMK1Q8TAS1 419 aaKnown RBP4.3□□□□□ -1.72
FOXN3-216ENST00000557496 TINF2Q9BSI4 451 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 JADE2Q9NQC1 790 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 ZDHHC9Q9Y397 364 aa4.3□□□□□ -1.72
FOXN3-216ENST00000557496 CNOT4O95628 575 aaKnown RBP4.29□□□□□ -1.72
FOXN3-216ENST00000557496 LTFP02788 710 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 FAHP16930 419 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 ACVRL1P37023 503 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 GDF5P43026 501 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 TUSC3Q13454 348 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 DDR2Q16832 855 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 PAN2Q504Q3 1202 aaKnown RBP4.29□□□□□ -1.72
FOXN3-216ENST00000557496 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 Q6ZUG5 572 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 MCF2L2Q86YR7 1114 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 RBM12BQ8IXT5 1001 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms