RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CHTF18Q8WVB6 975 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 CD244Q9BZW8 370 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 IRF2BPLQ9H1B7 796 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 RXFP1Q9HBX9 757 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 H2AFY2Q9P0M6 372 aaPredicted RBP6.39□□□□□ -1.39
PRPF39-212ENST00000557477 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
PRPF39-212ENST00000557477 A0A1W2PQJ5 194 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 MAN2B1O00754 1011 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 KRT37O76014 449 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 FKBP9O95302 570 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 RAC2P15153 192 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 PMLP29590 882 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 GUCY2FP51841 1108 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 GP2P55259 537 aaKnown RBP6.38□□□□□ -1.39
PRPF39-212ENST00000557477 SART3Q15020 963 aaKnown RBP6.38□□□□□ -1.39
PRPF39-212ENST00000557477 FKBP9P1Q75LS8 142 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 OTOP1Q7RTM1 612 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 COG1Q8WTW3 980 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 MYLIPQ8WY64 445 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
PRPF39-212ENST00000557477 SLC6A20Q9NP91 592 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
PRPF39-212ENST00000557477 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
PRPF39-212ENST00000557477 EIF4G1Q04637 1599 aaKnown RBP6.38□□□□□ -1.39
PRPF39-212ENST00000557477 PHLDB1Q86UU1 1377 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 ZEB2O60315 1214 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 KATNA1O75449 491 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 ZBTB48P10074 688 aaPredicted RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 LSSP48449 732 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 RBM10P98175 930 aaKnown RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 RNF219Q5W0B1 726 aaPredicted RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 STEAP3Q658P3 488 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 HHIPL2Q6UWX4 724 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 CABP7Q86V35 215 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 SPATS2Q86XZ4 545 aaKnown RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 NOSTRINQ8IVI9 506 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 ABI1Q8IZP0 508 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 UHMK1Q8TAS1 419 aaKnown RBP6.37□□□□□ -1.39
PRPF39-212ENST00000557477 BOCQ9BWV1 1114 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 RNF32Q9H0A6 362 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 TNFRSF12AQ9NP84 129 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 EMC7Q9NPA0 242 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 OXSMQ9NWU1 459 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 DSEQ9UL01 958 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 SRPK3Q9UPE1 567 aa6.37□□□□□ -1.39
PRPF39-212ENST00000557477 WASHC2CQ9Y4E1 1318 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 KRIT1O00522 736 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 DVL2O14641 736 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 SDHBP21912 280 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 IRF9Q00978 393 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 EMC4Q5J8M3 183 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 CPZQ66K79 652 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 NECAB2Q7Z6G3 386 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 TRIM8Q9BZR9 551 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 SLC5A4Q9NY91 659 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
PRPF39-212ENST00000557477 SCDO00767 359 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 SLC27A2O14975 620 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 LTFP02788 710 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 S100BP04271 92 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-212ENST00000557477 DBHP09172 617 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 PNLIPP16233 465 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 SLC6A11P48066 632 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 KPNA1P52294 538 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-212ENST00000557477 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
PRPF39-212ENST00000557477 MTMR1Q13613 665 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 SEC23AQ15436 765 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 ARHGAP44Q17R89 818 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 FIGNQ5HY92 759 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 FYB2Q5VWT5 728 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 ABHD4Q8TB40 342 aa6.35□□□□□ -1.39
PRPF39-212ENST00000557477 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 SGSM2O43147 1006 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 SRGAP3O43295 1099 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 TGM5O43548 720 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 TADA3O75528 432 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 SLC9A1P19634 815 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 ARL4AP40617 200 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 SNX17Q15036 470 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 DCP2Q8IU60 420 aaKnown RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 FLAD1Q8NFF5 587 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 MTMR8Q96EF0 704 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 ASPSCR1Q9BZE9 553 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 VTA1Q9NP79 307 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 MYOTQ9UBF9 498 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 PALD1Q9ULE6 856 aa6.34□□□□□ -1.39
PRPF39-212ENST00000557477 G3BP2Q9UN86 482 aaKnown RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 YBX2Q9Y2T7 364 aaKnown RBP6.34□□□□□ -1.39
PRPF39-212ENST00000557477 OAS3Q9Y6K5 1087 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms