RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 DDX41Q9UJV9 622 aaKnown RBP9.43□□□□□ -0.9
PCNX1-215ENST00000557428 PLXNA3P51805 1871 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ABCB11O95342 1321 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ADGRA3Q8IWK6 1321 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-215ENST00000557428 HAS3O00219 553 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 TREHO43280 583 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 GGPS1O95749 300 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 CFBP00751 764 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 IBSPP21815 317 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ZXDAP98168 799 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 COL19A1Q14993 1142 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 PKN1Q16512 942 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ZMYM1Q5SVZ6 1142 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 VPS53Q5VIR6 699 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ZBTB33Q86T24 672 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 SERINC5Q86VE9 423 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 PPP2R3CQ969Q6 453 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 RPGRIP1Q96KN7 1286 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 OSBPL7Q9BZF2 842 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 LMAN2LQ9H0V9 348 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ALG13Q9NP73 1137 aaKnown RBP9.42□□□□□ -0.9
PCNX1-215ENST00000557428 KAT6AQ92794 2004 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 ZDBF2Q9HCK1 2354 aa9.42□□□□□ -0.9
PCNX1-215ENST00000557428 H0Y858 1186 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 ORC4O43929 436 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 SMIM10L2AP0DMW4 78 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 SMIM10L2BP0DMW5 78 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 BMPR1AP36894 532 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 HAND2P61296 217 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 BTG3Q14201 252 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-215ENST00000557428 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 BMP8AQ7Z5Y6 402 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 RBM23Q86U06 439 aaKnown RBP9.41□□□□□ -0.9
PCNX1-215ENST00000557428 MCF2L2Q86YR7 1114 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-215ENST00000557428 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-215ENST00000557428 IWS1Q96ST2 819 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
PCNX1-215ENST00000557428 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 PXMP2Q9NR77 195 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 TLR9Q9NR96 1032 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 RWDD3Q9Y3V2 267 aa9.41□□□□□ -0.9
PCNX1-215ENST00000557428 PLXNA4Q9HCM2 1894 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 ZFHX2Q9C0A1 2572 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 NOP56O00567 594 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 FOXP2O15409 715 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 EIF3JO75822 258 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 MMP1P03956 469 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 RB1P06400 928 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 NR3C2P08235 984 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 GHRP10912 638 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 SP100P23497 879 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 NRIP1P48552 1158 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 RRP1P56182 461 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 FOXK2Q01167 660 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 HSDL1Q3SXM5 330 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 PAN2Q504Q3 1202 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 CELF3Q5SZQ8 465 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 GPATCH4Q5T3I0 446 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 ADGRD2Q7Z7M1 963 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 APBB2Q92870 758 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 VAT1LQ9HCJ6 419 aa9.4□□□□□ -0.9
PCNX1-215ENST00000557428 BARX2Q9UMQ3 279 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 MRPL11Q9Y3B7 192 aaKnown RBP9.4□□□□□ -0.9
PCNX1-215ENST00000557428 C5orf67F2Z3F1 127 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 H3BRB1 525 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 LGALS2P05162 132 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
PCNX1-215ENST00000557428 UBA1P22314 1058 aaKnown RBP9.39□□□□□ -0.91
PCNX1-215ENST00000557428 NOVP48745 357 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 SP4Q02446 784 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 SIGLEC14Q08ET2 396 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 ADAM15Q13444 863 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 QRICH1Q2TAL8 776 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 UTP14CQ5TAP6 766 aaKnown RBP9.39□□□□□ -0.91
PCNX1-215ENST00000557428 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 ADGRF4Q8IZF3 695 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 IRF2BPLQ9H1B7 796 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 TUT1Q9H6E5 874 aaKnown RBP9.39□□□□□ -0.91
PCNX1-215ENST00000557428 SETD4Q9NVD3 440 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 ANAPC4Q9UJX5 808 aa9.39□□□□□ -0.91
PCNX1-215ENST00000557428 USP15Q9Y4E8 981 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-215ENST00000557428 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 PPFIA4O75335 1185 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 GNAT1P11488 350 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 AVPR2P30518 371 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 HOXA13P31271 388 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-215ENST00000557428 SPOUT1Q5T280 376 aaKnown RBP9.38□□□□□ -0.91
PCNX1-215ENST00000557428 KCNV1Q6PIU1 500 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 ASCL5Q7RTU5 278 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 TRIM50Q86XT4 487 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 SMRP1Q8NCR6 262 aa9.38□□□□□ -0.91
PCNX1-215ENST00000557428 IL31RAQ8NI17 732 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms