RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TRIM43BA6NCK2 446 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 MEIS1O00470 390 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 F2P00734 622 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 USP11P51784 963 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-209ENST00000557342 RASGRP4Q8TDF6 673 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 CRYGNQ8WXF5 182 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 TRIM43Q96BQ3 446 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-209ENST00000557342 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 GPR20Q99678 358 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 SDF4Q9BRK5 362 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
SLIRP-209ENST00000557342 ALG1Q9BT22 464 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 PHF20Q9BVI0 1012 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 KCNH7Q9NS40 1196 aa14.22□□□□□ -0.13
SLIRP-209ENST00000557342 NFASCO94856 1347 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 ADAMTS3O15072 1205 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 B4GALT4O60513 344 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 ATP9AO75110 1047 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 TIMP1P01033 207 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 ZNF286BP0CG31 522 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 CIITAP33076 1130 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 PSEN2P49810 448 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-209ENST00000557342 MFSD10Q14728 455 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 CYP2W1Q8TAV3 490 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 KAT2BQ92831 832 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 BACH2Q9BYV9 841 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 UBE2OQ9C0C9 1292 aaKnown RBP14.21□□□□□ -0.13
SLIRP-209ENST00000557342 PRO3102Q9H379 93 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 AGO4Q9HCK5 861 aaKnown RBP14.21□□□□□ -0.13
SLIRP-209ENST00000557342 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 TBX21Q9UL17 535 aa14.21□□□□□ -0.13
SLIRP-209ENST00000557342 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
SLIRP-209ENST00000557342 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-209ENST00000557342 WDR81Q562E7 1941 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 M0R2N6 131 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 HAS3O00219 553 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 LGALS2P05162 132 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 ARP10275 920 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 FDPSP14324 419 aaKnown RBP14.2□□□□□ -0.14
SLIRP-209ENST00000557342 MCM2P49736 904 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 TRIM29Q14134 588 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 KRT25Q7Z3Z0 450 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 SEPT1Q8WYJ6 367 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 BADQ92934 168 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 C16orf70Q9BSU1 422 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 TRPV6Q9H1D0 765 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-209ENST00000557342 PKD2L1Q9P0L9 805 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 SLC9A2Q9UBY0 812 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-209ENST00000557342 KCNJ14Q9UNX9 436 aa14.2□□□□□ -0.14
SLIRP-209ENST00000557342 CEP290O15078 2479 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 IGLV3-22A0A075B6J6 115 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 CCDC194A0A1B0GVG4 234 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 H3BRB1 525 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 HMGN5P82970 282 aaKnown RBP14.19□□□□□ -0.14
SLIRP-209ENST00000557342 SP4Q02446 784 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 ST3GAL1Q11201 340 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 NONOQ15233 471 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLIRP-209ENST00000557342 NPY5RQ15761 445 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 HABP4Q5JVS0 413 aaKnown RBP14.19□□□□□ -0.14
SLIRP-209ENST00000557342 TMEM199Q8N511 208 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 HIPK3Q9H422 1215 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 TUT1Q9H6E5 874 aaKnown RBP14.19□□□□□ -0.14
SLIRP-209ENST00000557342 TRMT13Q9NUP7 481 aaKnown RBP14.19□□□□□ -0.14
SLIRP-209ENST00000557342 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 NOD1Q9Y239 953 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
SLIRP-209ENST00000557342 IPO5O00410 1097 aaKnown RBP14.18□□□□□ -0.14
SLIRP-209ENST00000557342 JAK2O60674 1132 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 ITGB8P26012 769 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 KRT2P35908 639 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 TCF7P36402 384 aaPredicted RBP14.18□□□□□ -0.14
SLIRP-209ENST00000557342 PTGISQ16647 500 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 PRR16Q569H4 304 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 UTP14CQ5TAP6 766 aaKnown RBP14.18□□□□□ -0.14
SLIRP-209ENST00000557342 MFSD5Q6N075 450 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 MOXD1Q6UVY6 613 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 HDAC6Q9UBN7 1215 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 TCEAL9Q9UHQ7 104 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 TANC1Q9C0D5 1861 aa14.18□□□□□ -0.14
SLIRP-209ENST00000557342 GSTTP1A0A1W2PQM5 241 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 FPGSQ05932 587 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 ITGB3BPQ13352 177 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms