RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 MTIF3Q9H2K0 278 aaKnown RBP18.95■□□□□ 0.62
VSX1-207ENST00000557285 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 H3BRB1 525 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 HAS3O00219 553 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 ATP9AO75110 1047 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 IQCF3P0C7M6 154 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 TOB2Q14106 344 aaPredicted RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 JAKMIP3Q5VZ66 844 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 CCDC155Q8N6L0 562 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 HERVK_113Q902F9 699 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 DHX38Q92620 1227 aaKnown RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 CTAGE1Q96RT6 745 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 SLC26A6Q9BXS9 759 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 ANO3Q9BYT9 981 aa18.94■□□□□ 0.62
VSX1-207ENST00000557285 TUT1Q9H6E5 874 aaKnown RBP18.94■□□□□ 0.62
VSX1-207ENST00000557285 CDH23Q9H251 3354 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 hCG_1984214I3L0E3 225 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 PITPNM1O00562 1244 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 DNAJB2P25686 324 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 PDIA3P30101 505 aaKnown RBP18.93■□□□□ 0.62
VSX1-207ENST00000557285 PBX2P40425 430 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 STK3Q13188 491 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 HIC1Q14526 733 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 ZNF713Q8N859 430 aaPredicted RBP18.93■□□□□ 0.62
VSX1-207ENST00000557285 GPRASP2Q96D09 838 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 CDHR1Q96JP9 859 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 GUCD1Q96NT3 240 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 AGXT2Q9BYV1 514 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 TTYH1Q9H313 450 aaPredicted RBP18.93■□□□□ 0.62
VSX1-207ENST00000557285 UBIAD1Q9Y5Z9 338 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 NID2Q14112 1375 aa18.93■□□□□ 0.62
VSX1-207ENST00000557285 GBF1Q92538 1859 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
VSX1-207ENST00000557285 SMIM10L2AP0DMW4 78 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 SMIM10L2BP0DMW5 78 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 KCNA2P16389 499 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 RASIP1Q5U651 963 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 FBXL16Q8N461 479 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 WNT8BQ93098 351 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 TIFAQ96CG3 184 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 VWCEQ96DN2 955 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 SENP7Q9BQF6 1050 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 JADE2Q9NQC1 790 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
VSX1-207ENST00000557285 C17orf102A2RUQ5 167 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 ADAMTS3O15072 1205 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 PRPF3O43395 683 aaKnown RBP18.91■□□□□ 0.62
VSX1-207ENST00000557285 FOSP01100 380 aaPredicted RBP18.91■□□□□ 0.62
VSX1-207ENST00000557285 ZNF76P36508 570 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 PKN1Q16512 942 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
VSX1-207ENST00000557285 CAGE1Q8TC20 777 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 UIMC1Q96RL1 719 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 PBX4Q9BYU1 374 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 SLC4A7Q9Y6M7 1214 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
VSX1-207ENST00000557285 CKBP12277 381 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 SELPP16109 830 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 MARK3P27448 753 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 RFC2P35250 354 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 TCF7P36402 384 aaPredicted RBP18.9■□□□□ 0.62
VSX1-207ENST00000557285 RABGGTBP53611 331 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 ATP6V0A1Q93050 837 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 MXRA8Q9BRK3 442 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 TM6SF1Q9BZW5 370 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 GLT8D2Q9H1C3 349 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 C6orf50Q9HD87 102 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 VPS54Q9P1Q0 977 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 ZNF215Q9UL58 517 aaPredicted RBP18.9■□□□□ 0.62
VSX1-207ENST00000557285 STXBP5LQ9Y2K9 1186 aa18.9■□□□□ 0.62
VSX1-207ENST00000557285 CPLX1O14810 134 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 PFKMP08237 780 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 ARP10275 920 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 ACTN1P12814 892 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 THPOP40225 353 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 CLK2P49760 499 aaKnown RBP18.89■□□□□ 0.61
VSX1-207ENST00000557285 ARHGAP4P98171 946 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 PTK7Q13308 1070 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 AP3B2Q13367 1082 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 NTRK3Q16288 839 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 RASGRP4Q8TDF6 673 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 CCDC12Q8WUD4 166 aaPredicted RBP18.89■□□□□ 0.61
VSX1-207ENST00000557285 MYLIPQ8WY64 445 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 CDX2Q99626 313 aaPredicted RBP18.89■□□□□ 0.61
VSX1-207ENST00000557285 KCNH7Q9NS40 1196 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 SETD4Q9NVD3 440 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 KAT6AQ92794 2004 aa18.89■□□□□ 0.61
VSX1-207ENST00000557285 DDX39AO00148 427 aaKnown RBP18.88■□□□□ 0.61
VSX1-207ENST00000557285 TREHO43280 583 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 IFNAR1P17181 557 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 SREBF1P36956 1147 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 SSRP1Q08945 709 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms