RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 NLRX1Q86UT6 975 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 TBC1D19Q8N5T2 526 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 C4orf50Q6ZRC1 276 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 RAB42Q8N4Z0 105 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 DEPTORQ8TB45 409 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 DEPDC1BQ8WUY9 529 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 NT5C2P49902 561 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 GOLPH3LQ9H4A5 285 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 IRAK4Q9NWZ3 460 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 EPN1Q9Y6I3 576 aaPredicted RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 DIAPH2O60879 1101 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ADRM1Q16186 407 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 HIF1AQ16665 826 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 FAM207AQ9NSI2 230 aaPredicted RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 AQRO60306 1485 aaKnown RBP eCLIP9.48□□□□□ -0.895e-6■■□□□ 14.3
SYNE3-205ENST00000557275 MFAP3P55082 362 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 MTX1Q13505 466 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 MORC3Q14149 939 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 RRS1Q15050 365 aaKnown RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 E7ENQ6 273 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 NDUFA13Q9P0J0 144 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 BFSP2Q13515 415 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 TAGAPQ8N103 731 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ADAM30Q9UKF2 790 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 KRT72Q14CN4 511 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 KLHL38Q2WGJ6 581 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 PPP1R2P1Q96PQ5 205 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 HIBCHQ6NVY1 386 aaPredicted RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ZMYND12Q9H0C1 365 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 M0R3G1 203 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 GAS7O60861 476 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 LIG4P49917 911 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ANKRD27Q96NW4 1050 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 LSM14BQ9BX40 385 aaKnown RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 RAD21L1Q9H4I0 556 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 H7C0C1 242 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 ATP5OP48047 213 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 LRRC8AQ8IWT6 810 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MCUQ8NE86 351 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 CLEC4MQ9H2X3 399 aaPredicted RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MRC2Q9UBG0 1479 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 POC1B-GALNT4F8VUJ3 575 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PIK3CAP42336 1068 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TFDP1Q14186 410 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 DYDC2Q96IM9 177 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 AK8Q96MA6 479 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 VIPAS39Q9H9C1 493 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TEX28O15482 410 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 EFTUD2Q15029 972 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■■■■□ 24.2
SYNE3-205ENST00000557275 DCLK2Q8N568 766 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MAGEB6Q8N7X4 407 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 CROCCQ5TZA2 2017 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TOM1O60784 492 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MRPS35P82673 323 aaKnown RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 SURF1Q15526 300 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 FAM45BPQ6NSW5 357 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PPP4R3CPQ6ZMV5 832 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PITPNM3Q9BZ71 974 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 KLC1Q07866 573 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MAGOHBQ96A72 148 aaKnown RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 CARD9Q9H257 536 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 UBA2Q9UBT2 640 aaPredicted RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 IGSF3O75054 1194 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TOM1L1O75674 476 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PARP10Q53GL7 1025 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 USP40Q9NVE5 1235 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PCDHGB4Q9UN71 923 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 EIF4G3O43432 1585 aaKnown RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 HSPA4LO95757 839 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 KRT33BQ14525 404 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 DMC1Q14565 340 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TTBK2Q6IQ55 1244 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TRIM54Q9BYV2 358 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 SAT1P21673 171 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 NUP107P57740 925 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TEKT4Q8WW24 435 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 EHD2Q9NZN4 543 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 ZFP69BQ9UJL9 534 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TROQ12816 1431 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms