RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 NSMFQ6X4W1 530 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 PROM2Q8N271 834 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 FGFBP2Q9BYJ0 223 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 GOLPH3Q9H4A6 298 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 PCDHA13Q9Y5I0 950 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 GJA3Q9Y6H8 435 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 EHHADHQ08426 723 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
TMEM55B-207ENST00000557041 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 ALAS1P13196 640 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 CAPN2P17655 700 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 KLHL7Q8IXQ5 586 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 ZBTB39O15060 712 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 MED24O75448 989 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 ABCB4P21439 1286 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 WHAMMP3Q1A5X7 153 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 ADAT2Q7Z6V5 191 aaKnown RBP16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 DUOX1Q9NRD9 1551 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 PROCA1Q8NCQ7 364 aaPredicted RBP16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
TMEM55B-207ENST00000557041 SASH3O75995 380 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PBX1P40424 430 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PPP1R2P41236 205 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PLA2G4AP47712 749 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 STAT2P52630 851 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 HERVK_113P62684 666 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 CKAP4Q07065 602 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 LEKR1Q6ZMV7 388 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 IKZF4Q9H2S9 585 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 GAKO14976 1311 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 LRRC10BA6NIK2 292 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 N4BP1O75113 896 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 ASIC2Q16515 512 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 HAS1Q92839 578 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 FAM163AQ96GL9 167 aaPredicted RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PCIF1Q9H4Z3 704 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 KDM3AQ9Y4C1 1321 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
TMEM55B-207ENST00000557041 TMEM110-MUSTN1A8MSY1 372 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 HS2ST1Q7LGA3 356 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 M0R2N6 131 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 GABPB1Q06547 395 aaPredicted RBP16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 RIN2Q8WYP3 895 aaPredicted RBP16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 NOX5Q96PH1 765 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 A0A1W2PQC6 194 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 CCDC151A5D8V7 595 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 EPB41P11171 864 aaKnown RBP16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 ARHGAP25P42331 645 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 MAP9Q49MG5 647 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 MS4A14Q96JA4 679 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
TMEM55B-207ENST00000557041 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 MYBP10242 640 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 HHIPL2Q6UWX4 724 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 CAPN6Q9Y6Q1 641 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 LRRN2O75325 713 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 VAV2P52735 878 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 LRRC63Q05C16 580 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 PDIA5Q14554 519 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 ODR4Q5SWX8 454 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 TRIM31Q9BZY9 425 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 MYH6P13533 1939 aa16.88■□□□□ 0.29
TMEM55B-207ENST00000557041 ESYT3A0FGR9 886 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms