RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 BRMS1Q9HCU9 246 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 PCDHB14Q9Y5E9 798 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 TAF6LQ9Y6J9 622 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 EP400Q96L91 3159 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 CPDO75976 1380 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 PLEKHG2Q9H7P9 1386 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 NWD1Q149M9 1564 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 HRKO00198 91 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 BUB1BO60566 1050 aaPredicted RBP5.52□□□□□ -1.53
SRP54-212ENST00000556992 EIF5BO60841 1220 aaKnown RBP5.52□□□□□ -1.53
SRP54-212ENST00000556992 EVA1CP58658 441 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 ERVFRD-1P60508 538 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 RNF4P78317 190 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 NUCB1Q02818 461 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 MPP2Q14168 576 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 KRT24Q2M2I5 525 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 NUP43Q8NFH3 380 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 FCRL2Q96LA5 508 aaPredicted RBP5.52□□□□□ -1.53
SRP54-212ENST00000556992 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 PRDM11Q9NQV5 511 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 ERVK13-1Q9NX77 482 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 HDAC5Q9UQL6 1122 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 PCDHA5Q9Y5H7 936 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 HCFC2Q9Y5Z7 792 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 TOPAZ1Q8N9V7 1692 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 CEMIPQ8WUJ3 1361 aa5.52□□□□□ -1.53
SRP54-212ENST00000556992 MON2Q7Z3U7 1717 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 A0A1B0GTL3 188 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 PRICKLE3O43900 615 aaPredicted RBP5.51□□□□□ -1.53
SRP54-212ENST00000556992 HMMRO75330 724 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 MPOP05164 745 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 GNAI3P08754 354 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 CTSKP43235 329 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 CHRNA2Q15822 529 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 CRTC3Q6UUV7 619 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 RPTNQ6XPR3 784 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 CHD1LQ86WJ1 897 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 SP8Q8IXZ3 490 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 IPO9Q96P70 1041 aaKnown RBP5.51□□□□□ -1.53
SRP54-212ENST00000556992 DCTPP1Q9H773 170 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 GFOD1Q9NXC2 390 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 IMPACTQ9P2X3 320 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 DBF4Q9UBU7 674 aaPredicted RBP5.51□□□□□ -1.53
SRP54-212ENST00000556992 FMN2Q9NZ56 1722 aa5.51□□□□□ -1.53
SRP54-212ENST00000556992 TNS3Q68CZ2 1445 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 FAM86C2PA6NEL3 165 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 FFAR3O14843 346 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 SIGLEC6O43699 453 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 GNAI2P04899 355 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ADRB1P08588 477 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 PHKG2P15735 406 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ZNF200P98182 395 aaPredicted RBP5.5□□□□□ -1.53
SRP54-212ENST00000556992 CYP4F8P98187 520 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 RTP5Q14D33 572 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ANKRD45Q5TZF3 282 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 FBXL19Q6PCT2 694 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 SLC4A10Q6U841 1118 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 TOM1L2Q6ZVM7 507 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 G2E3Q7L622 706 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 TMC4Q7Z404 712 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ANKRD44Q8N8A2 993 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 LINC01356Q8N9X3 169 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ZCRB1Q8TBF4 217 aaKnown RBP5.5□□□□□ -1.53
SRP54-212ENST00000556992 JMJD8Q96S16 334 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ANTXR1Q9H6X2 564 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 SLC52A2Q9HAB3 445 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 UPF2Q9HAU5 1272 aaKnown RBP5.5□□□□□ -1.53
SRP54-212ENST00000556992 CHST7Q9NS84 486 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 HYPKQ9NX55 129 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 ANKRD26Q9UPS8 1709 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 CHD2O14647 1828 aaKnown RBP5.5□□□□□ -1.53
SRP54-212ENST00000556992 NRKQ7Z2Y5 1582 aa5.5□□□□□ -1.53
SRP54-212ENST00000556992 NCAPD2Q15021 1401 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 SLIT3O75094 1523 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 NFAT5O94916 1531 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 KIF20BQ96Q89 1820 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 ERVV-2B6SEH9 535 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 DDX58O95786 925 aaKnown RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 MSL3P1P0C860 447 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 EIF2S2P20042 333 aaKnown RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 ARL4AP40617 200 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 CRKP46108 304 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 PLP2Q04941 152 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 PLEKHN1Q494U1 663 aaPredicted RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 OLFML2BQ68BL8 750 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 LSRQ86X29 649 aaPredicted RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 CRELD1Q96HD1 420 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 RSRP1Q9BUV0 290 aa5.49□□□□□ -1.53
SRP54-212ENST00000556992 MKRN2Q9H000 416 aaKnown RBP5.49□□□□□ -1.53
SRP54-212ENST00000556992 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.49□□□□□ -1.53
SRP54-212ENST00000556992 TNFRSF12AQ9NP84 129 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms