RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ABRAQ8N0Z2 381 aa26.71■■□□□ 1.87
SIX4-203ENST00000556952 MPHOSPH6Q99547 160 aaKnown RBP26.71■■□□□ 1.87
SIX4-203ENST00000556952 LOC102724159A0A0B4J2E5 919 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 ACTN4O43707 911 aaKnown RBP26.7■■□□□ 1.86
SIX4-203ENST00000556952 CDC25AP30304 524 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 PRMT2P55345 433 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 SPIRE1Q08AE8 756 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 PWP2Q15269 919 aaKnown RBP26.7■■□□□ 1.86
SIX4-203ENST00000556952 LRCH2Q5VUJ6 765 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 KRT79Q5XKE5 535 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 RASSF8Q8NHQ8 419 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 GJA10Q969M2 543 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 DHX58Q96C10 678 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 GPRASP2Q96D09 838 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 RIT2Q99578 217 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 KCNH7Q9NS40 1196 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 VAV3Q9UKW4 847 aa26.7■■□□□ 1.86
SIX4-203ENST00000556952 IPO5O00410 1097 aaKnown RBP26.69■■□□□ 1.86
SIX4-203ENST00000556952 MAFGO15525 162 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 STRNO43815 780 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 SLFN14P0C7P3 912 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 ARP10275 920 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 KARSQ15046 597 aaKnown RBP26.69■■□□□ 1.86
SIX4-203ENST00000556952 E2F4Q16254 413 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 MORN1Q5T089 497 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 LRSAM1Q6UWE0 723 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 NLRX1Q86UT6 975 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 CEP57L1Q8IYX8 460 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 CALML4Q96GE6 196 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 INPP4AQ96PE3 977 aaPredicted RBP26.69■■□□□ 1.86
SIX4-203ENST00000556952 MMTAG2Q9BU76 263 aaKnown RBP26.69■■□□□ 1.86
SIX4-203ENST00000556952 PANK2Q9BZ23 570 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 WDR11Q9BZH6 1224 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 SERTAD1Q9UHV2 236 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 ASTN1O14525 1302 aa26.69■■□□□ 1.86
SIX4-203ENST00000556952 SOWAHBA6NEL2 793 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 PSMD10O75832 226 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 EDNRBP24530 442 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 STXBP2Q15833 593 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 ZFP91Q96JP5 570 aaPredicted RBP26.68■■□□□ 1.86
SIX4-203ENST00000556952 CDHR1Q96JP9 859 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 IVNS1ABPQ9Y6Y0 642 aa26.68■■□□□ 1.86
SIX4-203ENST00000556952 GAS7O60861 476 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 PPP2R5CQ13362 524 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 GNPTABQ3T906 1256 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 RRAGBQ5VZM2 374 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 HAUS3Q68CZ6 603 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 ERMNQ8TAM6 284 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 RAET1EQ8TD07 263 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 SNX29Q8TEQ0 813 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 USP6NLQ92738 828 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 TEKT3Q9BXF9 490 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 CUEDC2Q9H467 287 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 AGO4Q9HCK5 861 aaKnown RBP26.67■■□□□ 1.86
SIX4-203ENST00000556952 KDM3AQ9Y4C1 1321 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 STAT6P42226 847 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 GRB14Q14449 540 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 CKAP2LQ8IYA6 745 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 NUDT12Q9BQG2 462 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 MAGEF1Q9HAY2 307 aa26.67■■□□□ 1.86
SIX4-203ENST00000556952 EIF3JO75822 258 aaKnown RBP26.66■■□□□ 1.86
SIX4-203ENST00000556952 SOCS4Q8WXH5 440 aa26.66■■□□□ 1.86
SIX4-203ENST00000556952 CDK5RAP3Q96JB5 506 aa26.66■■□□□ 1.86
SIX4-203ENST00000556952 UIMC1Q96RL1 719 aa26.66■■□□□ 1.86
SIX4-203ENST00000556952 TBC1D22BQ9NU19 505 aa26.66■■□□□ 1.86
SIX4-203ENST00000556952 SLC15A5A6NIM6 579 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 PGK2P07205 417 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 CYP2B6P20813 491 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 IRF5Q13568 498 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 GSE1Q14687 1217 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 HYIQ5T013 277 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 NCAPH2Q6IBW4 605 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 PDXDC2PQ6P474 469 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 SH3TC2Q8TF17 1288 aa26.65■■□□□ 1.86
SIX4-203ENST00000556952 ELNP15502 786 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 PLCG1P19174 1290 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 ADORA2AP29274 412 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 PDE4DQ08499 809 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 MAP2K5Q13163 448 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 ABHD8Q96I13 439 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 FGD4Q96M96 766 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 NT5C3AQ9H0P0 336 aa26.64■■□□□ 1.86
SIX4-203ENST00000556952 BRCA2P51587 3418 aa26.64■■□□□ 1.85
SIX4-203ENST00000556952 POSTNQ15063 836 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 B3GNT9Q6UX72 402 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 SH3RF1Q7Z6J0 888 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 KIAA1468Q9P260 1216 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 STK17AQ9UEE5 414 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 ADCY3O60266 1144 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 RGS20O76081 388 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 CCDC192P0DO97 292 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 CCT6AP40227 531 aaKnown RBP26.63■■□□□ 1.85
SIX4-203ENST00000556952 MDM2Q00987 491 aaPredicted RBP26.63■■□□□ 1.85
SIX4-203ENST00000556952 GRB10Q13322 594 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 ZRSR1Q15695 479 aaKnown RBP26.63■■□□□ 1.85
SIX4-203ENST00000556952 SLC9C1Q4G0N8 1177 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 TMEM119Q4V9L6 283 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 NAALADL2Q58DX5 795 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 SASS6Q6UVJ0 657 aa26.63■■□□□ 1.85
SIX4-203ENST00000556952 FUCA2Q9BTY2 467 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms