RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PCNX4Q63HM2 1172 aa19.77■□□□□ 0.76
CHGA-206ENST00000556876 SEPT8Q92599 483 aa19.77■□□□□ 0.76
CHGA-206ENST00000556876 APBB2Q92870 758 aa19.77■□□□□ 0.76
CHGA-206ENST00000556876 CCDC69A6NI79 296 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 MAFGO15525 162 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 MB21D2Q8IYB1 491 aaPredicted RBP19.76■□□□□ 0.75
CHGA-206ENST00000556876 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 IL31RAQ8NI17 732 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 TNPO1Q92973 898 aaKnown RBP19.76■□□□□ 0.75
CHGA-206ENST00000556876 C1QTNF1Q9BXJ1 281 aa19.76■□□□□ 0.75
CHGA-206ENST00000556876 TRANK1O15050 2925 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 RFXAPO00287 272 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 SMIM10L2AP0DMW4 78 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 SMIM10L2BP0DMW5 78 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 LIFRP42702 1097 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 MRPS9P82933 396 aaKnown RBP19.75■□□□□ 0.75
CHGA-206ENST00000556876 PLEKHG4Q58EX7 1191 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 TRAF7Q6Q0C0 670 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 CYFIP1Q7L576 1253 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 RBM8AQ9Y5S9 174 aaKnown RBP19.75■□□□□ 0.75
CHGA-206ENST00000556876 NCOR1O75376 2440 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 NRCAMQ92823 1304 aa19.75■□□□□ 0.75
CHGA-206ENST00000556876 DEFB103AP81534 67 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 SLC35G1Q2M3R5 365 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 DBF4BQ8NFT6 615 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 GPRASP2Q96D09 838 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 GPR20Q99678 358 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 RNPEPQ9H4A4 650 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 EHMT1Q9H9B1 1298 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 LY9Q9HBG7 655 aa19.74■□□□□ 0.75
CHGA-206ENST00000556876 EPOPA6NHQ4 379 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 PRC1O43663 620 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 ZNF200P98182 395 aaPredicted RBP19.73■□□□□ 0.75
CHGA-206ENST00000556876 PTPROQ16827 1216 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 TAF2Q6P1X5 1199 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 SYNE3Q6ZMZ3 975 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 FAM43BQ6ZT52 329 aaPredicted RBP19.73■□□□□ 0.75
CHGA-206ENST00000556876 RPAINQ86UA6 219 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 RSPH3Q86UC2 560 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 PSTPIP2Q9H939 334 aa19.73■□□□□ 0.75
CHGA-206ENST00000556876 LINC01553A4QN01 128 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 LPXNO60711 386 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 ANTXR2P58335 489 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 HTRA4P83105 476 aaPredicted RBP19.72■□□□□ 0.75
CHGA-206ENST00000556876 MBTPS1Q14703 1052 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 MYOCDQ8IZQ8 938 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 SUGCTQ9HAC7 445 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 SENP2Q9HC62 589 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 RTEL1Q9NZ71 1219 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 SLC12A7Q9Y666 1083 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 KIAA1217Q5T5P2 1943 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 XIRP2A4UGR9 3374 aa19.72■□□□□ 0.75
CHGA-206ENST00000556876 LCHNA4D1U4 455 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 SPDYE3A6NKU9 549 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 MEIS2O14770 477 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 TREHO43280 583 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 SORBS3O60504 671 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 TFF2Q03403 129 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 FAM26DQ5JW98 314 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 RNF20Q5VTR2 975 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 PIBF1Q8WXW3 757 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 SEPT1Q8WYJ6 367 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 GPKOWQ92917 476 aaPredicted RBP eCLIP19.71■□□□□ 0.75
CHGA-206ENST00000556876 WNT8BQ93098 351 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 TOP1MTQ969P6 601 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 TANC1Q9C0D5 1861 aa19.71■□□□□ 0.75
CHGA-206ENST00000556876 PRRC2BQ5JSZ5 2229 aaKnown RBP19.7■□□□□ 0.74
CHGA-206ENST00000556876 ARHGEF15O94989 841 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 USP17L6PQ6QN14 398 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 FBXO22Q8NEZ5 403 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 SP7Q8TDD2 431 aaPredicted RBP19.7■□□□□ 0.74
CHGA-206ENST00000556876 YME1L1Q96TA2 773 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 SETD4Q9NVD3 440 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 ERAP1Q9NZ08 941 aa19.7■□□□□ 0.74
CHGA-206ENST00000556876 SH2B2O14492 632 aaPredicted RBP19.69■□□□□ 0.74
CHGA-206ENST00000556876 COL9A1P20849 921 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 ARHGAP4P98171 946 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 SEMA3FQ13275 785 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 MKRN4PQ13434 485 aaPredicted RBP19.69■□□□□ 0.74
CHGA-206ENST00000556876 HIC1Q14526 733 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 PUS10Q3MIT2 529 aaKnown RBP19.69■□□□□ 0.74
CHGA-206ENST00000556876 GLT8D2Q9H1C3 349 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 SMARCAD1Q9H4L7 1026 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 SCN5AQ14524 2016 aa19.69■□□□□ 0.74
CHGA-206ENST00000556876 ADAM17P78536 824 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 UTP14CQ5TAP6 766 aaKnown RBP19.68■□□□□ 0.74
CHGA-206ENST00000556876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.68■□□□□ 0.74
CHGA-206ENST00000556876 SRBD1Q8N5C6 995 aaKnown RBP19.68■□□□□ 0.74
CHGA-206ENST00000556876 FANCBQ8NB91 859 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 TET1Q8NFU7 2136 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 ZFP91Q96JP5 570 aaPredicted RBP19.68■□□□□ 0.74
CHGA-206ENST00000556876 IFIH1Q9BYX4 1025 aaKnown RBP19.68■□□□□ 0.74
CHGA-206ENST00000556876 RBM28Q9NW13 759 aaKnown RBP19.68■□□□□ 0.74
CHGA-206ENST00000556876 RWDD3Q9Y3V2 267 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 MYH6P13533 1939 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 BDP1A6H8Y1 2624 aa19.68■□□□□ 0.74
CHGA-206ENST00000556876 RRN3P2A6NIE6 340 aa19.67■□□□□ 0.74
CHGA-206ENST00000556876 NCK2O43639 380 aa19.67■□□□□ 0.74
CHGA-206ENST00000556876 FOSP01100 380 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms