RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ITGB8P26012 769 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 PTPN11Q06124 597 aaPredicted RBP26.08■■□□□ 1.77
TDP1-216ENST00000556867 HABP4Q5JVS0 413 aaKnown RBP26.08■■□□□ 1.77
TDP1-216ENST00000556867 GALNT17Q6IS24 598 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 NIPA1Q7RTP0 329 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 DAGLBQ8NCG7 672 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 KATNAL1Q9BW62 490 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 MEIS1O00470 390 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 RAG1P15918 1043 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 RABEP1Q15276 862 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 NPY5RQ15761 445 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 CYP2W1Q8TAV3 490 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 GPR20Q99678 358 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 TRPV6Q9H1D0 765 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 KCNH7Q9NS40 1196 aa26.07■■□□□ 1.76
TDP1-216ENST00000556867 ORC3Q9UBD5 711 aaPredicted RBP26.07■■□□□ 1.76
TDP1-216ENST00000556867 HAS3O00219 553 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 PSEN2P49810 448 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 ST3GAL1Q11201 340 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 FAM47CQ5HY64 1035 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 SESTD1Q86VW0 696 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 NSUN7Q8NE18 718 aaKnown RBP26.06■■□□□ 1.76
TDP1-216ENST00000556867 WASF1Q92558 559 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 BADQ92934 168 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 C16orf70Q9BSU1 422 aa26.06■■□□□ 1.76
TDP1-216ENST00000556867 UBE2OQ9C0C9 1292 aaKnown RBP26.06■■□□□ 1.76
TDP1-216ENST00000556867 TIMP1P01033 207 aa26.05■■□□□ 1.76
TDP1-216ENST00000556867 SUPT20HL2P0C7V6 817 aa26.05■■□□□ 1.76
TDP1-216ENST00000556867 ZNF76P36508 570 aa26.05■■□□□ 1.76
TDP1-216ENST00000556867 MFSD10Q14728 455 aa26.05■■□□□ 1.76
TDP1-216ENST00000556867 BLIDQ8IZY5 108 aa26.05■■□□□ 1.76
TDP1-216ENST00000556867 TRMT13Q9NUP7 481 aaKnown RBP26.05■■□□□ 1.76
TDP1-216ENST00000556867 FAM86B1E9PN63 330 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 M0R2N6 131 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 DTNBO60941 627 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 LGALS2P05162 132 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 FAM86B2P0C5J1 330 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 ARP10275 920 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 FDPSP14324 419 aaKnown RBP26.04■■□□□ 1.76
TDP1-216ENST00000556867 XBP1P17861 261 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 PPP1R13LQ8WUF5 828 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 TBC1D32Q96NH3 1257 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 PHF20Q9BVI0 1012 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 PKD2L1Q9P0L9 805 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 NFASCO94856 1347 aa26.04■■□□□ 1.76
TDP1-216ENST00000556867 IGLV3-22A0A075B6J6 115 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 CIITAP33076 1130 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 CHMP4BP1P59074 171 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 KIAA0753Q2KHM9 967 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 IL27Q8NEV9 243 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 ZSCAN31Q96LW9 406 aaPredicted RBP26.03■■□□□ 1.76
TDP1-216ENST00000556867 ALG1Q9BT22 464 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 AGO4Q9HCK5 861 aaKnown RBP26.03■■□□□ 1.76
TDP1-216ENST00000556867 KCNJ14Q9UNX9 436 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 TELO2Q9Y4R8 837 aa26.03■■□□□ 1.76
TDP1-216ENST00000556867 SETQ01105 290 aaPredicted RBP26.02■■□□□ 1.76
TDP1-216ENST00000556867 SP4Q02446 784 aa26.02■■□□□ 1.76
TDP1-216ENST00000556867 PLA2G4DQ86XP0 818 aa26.02■■□□□ 1.76
TDP1-216ENST00000556867 NOC4LQ9BVI4 516 aaKnown RBP26.02■■□□□ 1.76
TDP1-216ENST00000556867 HIPK3Q9H422 1215 aa26.02■■□□□ 1.76
TDP1-216ENST00000556867 JPH1Q9HDC5 661 aaPredicted RBP26.02■■□□□ 1.76
TDP1-216ENST00000556867 SH2B1Q9NRF2 756 aaPredicted RBP26.02■■□□□ 1.76
TDP1-216ENST00000556867 H3BRB1 525 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 JAK2O60674 1132 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 MFSD5Q6N075 450 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 TDHQ8IZJ6 230 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 C7orf31Q8N865 590 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 SDF4Q9BRK5 362 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 PPP1R12CQ9BZL4 782 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 TUT1Q9H6E5 874 aaKnown RBP26.01■■□□□ 1.75
TDP1-216ENST00000556867 HDAC6Q9UBN7 1215 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 GTF2IRD1Q9UHL9 959 aa26.01■■□□□ 1.75
TDP1-216ENST00000556867 EDIL3O43854 480 aa26■■□□□ 1.75
TDP1-216ENST00000556867 USP11P51784 963 aa26■■□□□ 1.75
TDP1-216ENST00000556867 FPGSQ05932 587 aa26■■□□□ 1.75
TDP1-216ENST00000556867 ITGB3BPQ13352 177 aaPredicted RBP26■■□□□ 1.75
TDP1-216ENST00000556867 GDF6Q6KF10 455 aaPredicted RBP26■■□□□ 1.75
TDP1-216ENST00000556867 CCDC83Q8IWF9 413 aa26■■□□□ 1.75
TDP1-216ENST00000556867 SEPT1Q8WYJ6 367 aa26■■□□□ 1.75
TDP1-216ENST00000556867 GJB4Q9NTQ9 266 aa26■■□□□ 1.75
TDP1-216ENST00000556867 SLC9A2Q9UBY0 812 aa26■■□□□ 1.75
TDP1-216ENST00000556867 GSTTP1A0A1W2PQM5 241 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 ST18O60284 1047 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 CYP2C9P11712 490 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 TCF7P36402 384 aaPredicted RBP25.99■■□□□ 1.75
TDP1-216ENST00000556867 KRT25Q7Z3Z0 450 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 TRIM50Q86XT4 487 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 TBCKQ8TEA7 893 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 LLPHQ9BRT6 129 aaKnown RBP25.99■■□□□ 1.75
TDP1-216ENST00000556867 BACH2Q9BYV9 841 aa25.99■■□□□ 1.75
TDP1-216ENST00000556867 ZNF215Q9UL58 517 aaPredicted RBP25.99■■□□□ 1.75
TDP1-216ENST00000556867 CYP2C18P33260 490 aa25.98■■□□□ 1.75
TDP1-216ENST00000556867 PTGISQ16647 500 aa25.98■■□□□ 1.75
TDP1-216ENST00000556867 UTP14CQ5TAP6 766 aaKnown RBP25.98■■□□□ 1.75
TDP1-216ENST00000556867 LENG9Q96B70 501 aa25.98■■□□□ 1.75
TDP1-216ENST00000556867 CTAGE1Q96RT6 745 aa25.98■■□□□ 1.75
TDP1-216ENST00000556867 NOD1Q9Y239 953 aa25.98■■□□□ 1.75
TDP1-216ENST00000556867 TRIP12Q14669 1992 aaPredicted RBP25.98■■□□□ 1.75
TDP1-216ENST00000556867 UMODL1Q5DID0 1318 aa25.97■■□□□ 1.75
TDP1-216ENST00000556867 NONOQ15233 471 aaKnown RBP eCLIP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms