RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 AKR1A1P14550 325 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 MTFR1Q15390 333 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 DUSP28Q4G0W2 176 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 TNPO1Q92973 898 aaKnown RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 UNC93B1Q9H1C4 597 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 POLR3EQ9NVU0 708 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 GNEQ9Y223 722 aaKnown RBP19.69■□□□□ 0.74
TUBB3-211ENST00000556536 TELO2Q9Y4R8 837 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 MCM3APO60318 1980 aa19.69■□□□□ 0.74
TUBB3-211ENST00000556536 KIAA0100Q14667 2235 aaKnown RBP19.68■□□□□ 0.74
TUBB3-211ENST00000556536 TBX3O15119 743 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 GGPS1O95749 300 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 ATP2C1P98194 919 aaPredicted RBP19.68■□□□□ 0.74
TUBB3-211ENST00000556536 ARHGAP1Q07960 439 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 CYFIP1Q7L576 1253 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 FAM20AQ96MK3 541 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 SENP7Q9BQF6 1050 aa19.68■□□□□ 0.74
TUBB3-211ENST00000556536 HMX1Q9NP08 348 aaPredicted RBP19.68■□□□□ 0.74
TUBB3-211ENST00000556536 DDX39AO00148 427 aaKnown RBP19.67■□□□□ 0.74
TUBB3-211ENST00000556536 MARCH6O60337 910 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 PSMD10O75832 226 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
TUBB3-211ENST00000556536 TXKP42681 527 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 SLC39A14Q15043 492 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 IL17AQ16552 155 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 CELF3Q5SZQ8 465 aaKnown RBP19.67■□□□□ 0.74
TUBB3-211ENST00000556536 LRCH2Q5VUJ6 765 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 ATL3Q6DD88 541 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 LINC00301Q8NCQ3 95 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 RIT2Q99578 217 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.67■□□□□ 0.748e-7■■■■□ 24.2
TUBB3-211ENST00000556536 CEP131Q9UPN4 1083 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 NFASCO94856 1347 aa19.67■□□□□ 0.74
TUBB3-211ENST00000556536 GAS7O60861 476 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 BAG4O95429 457 aaKnown RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 BMP15O95972 392 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 GH1P01241 217 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 CCL5P13501 91 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 MARCKSP29966 332 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 KRT85P78386 507 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 IRX5P78411 483 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 NEDD9Q14511 834 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 DHX37Q8IY37 1157 aaKnown RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 SLFN12Q8IYM2 578 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 TBC1D22BQ9NU19 505 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 DDX20Q9UHI6 824 aaKnown RBP19.66■□□□□ 0.74
TUBB3-211ENST00000556536 VAV3Q9UKW4 847 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 CFAP45Q9UL16 551 aa19.66■□□□□ 0.74
TUBB3-211ENST00000556536 LAD1O00515 517 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 NKRFO15226 690 aaKnown RBP eCLIP19.65■□□□□ 0.745e-7■□□□□ 10.7
TUBB3-211ENST00000556536 DYNC1LI2O43237 492 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-211ENST00000556536 DUSP11O75319 330 aaKnown RBP19.65■□□□□ 0.74
TUBB3-211ENST00000556536 YEATS4O95619 227 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 CCNE2O96020 404 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 SP4Q02446 784 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 STK38Q15208 465 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 LHX8Q68G74 356 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 METTL7BQ6UX53 244 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 TLK2Q86UE8 772 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 GIMAP8Q8ND71 665 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-211ENST00000556536 OR6J1Q8NGC5 347 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 TEKT3Q9BXF9 490 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 UNC45AQ9H3U1 944 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 TTC12Q9H892 705 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-211ENST00000556536 MLXIPQ9HAP2 919 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 JPH1Q9HDC5 661 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-211ENST00000556536 RCOR1Q9UKL0 485 aa19.65■□□□□ 0.74
TUBB3-211ENST00000556536 RARBP10826 455 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 PRPHP41219 470 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 TECP42680 631 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 GRIN1Q05586 938 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 SPIRE1Q08AE8 756 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 LAMC2Q13753 1193 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 B3GNT9Q6UX72 402 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 LEO1Q8WVC0 666 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-211ENST00000556536 EMID1Q96A84 441 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-211ENST00000556536 SPATA33Q96N06 139 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 GDPD2Q9HCC8 539 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 PAK6Q9NQU5 681 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-211ENST00000556536 SLC9A2Q9UBY0 812 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 FBXO2Q9UK22 296 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-211ENST00000556536 PCDHA12Q9UN75 941 aa19.64■□□□□ 0.73
TUBB3-211ENST00000556536 SPTLC2O15270 562 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 CHMP2AO43633 222 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 HSDL1Q3SXM5 330 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 ARL6IP4Q66PJ3 421 aaKnown RBP19.63■□□□□ 0.73
TUBB3-211ENST00000556536 DTHD1Q6ZMT9 781 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 AFG1LQ8WV93 481 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 RNF208Q9H0X6 261 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 Q9Y3F1 56 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
TUBB3-211ENST00000556536 SZT2Q5T011 3432 aa19.63■□□□□ 0.73
TUBB3-211ENST00000556536 SYNRGQ9UMZ2 1314 aa19.62■□□□□ 0.73
TUBB3-211ENST00000556536 VWA3AA6NCI4 1184 aa19.62■□□□□ 0.73
TUBB3-211ENST00000556536 MYADML2A6NDP7 307 aa19.62■□□□□ 0.73
TUBB3-211ENST00000556536 EML1O00423 815 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms