RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 BTG3Q14201 252 aaPredicted RBP6.86□□□□□ -1.31
TDP1-215ENST00000556498 WDR43Q15061 677 aaKnown RBP eCLIP6.86□□□□□ -1.31
TDP1-215ENST00000556498 PROSER3Q2NL68 480 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 CCDC153Q494R4 210 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 NXPE4Q6UWF7 544 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 DSTYKQ6XUX3 929 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 TMC6Q7Z403 805 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 WDR75Q8IWA0 830 aaKnown RBP6.86□□□□□ -1.31
TDP1-215ENST00000556498 LRRC43Q8N309 656 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 GALNT6Q8NCL4 622 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 CLMNQ96JQ2 1002 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 TCF12Q99081 682 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 JPH2Q9BR39 696 aaPredicted RBP6.86□□□□□ -1.31
TDP1-215ENST00000556498 PBX4Q9BYU1 374 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 EHD4Q9H223 541 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 ATP6V0A4Q9HBG4 840 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 STAP2Q9UGK3 403 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 NAGPAQ9UK23 515 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 TRIM17Q9Y577 477 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 PDS5BQ9NTI5 1447 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 IQANK1A0A1B0GTG1 560 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 BIRC5O15392 142 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 ZNF254O75437 659 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 TMCC1O94876 653 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 MYL3P08590 195 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 EPXP11678 715 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 KRT13P13646 458 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 POLR2EP19388 210 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 ENDOUP21128 410 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 ALAS2P22557 587 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 HSD3B2P26439 372 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 EPS15P42566 896 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 GEMIN4P57678 1058 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 GJA9P57773 515 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 ATP11AP98196 1134 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 CDK17Q00537 523 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 MOGSQ13724 837 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 TOMM20Q15388 145 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 PERM1Q5SV97 790 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 HYIQ5T013 277 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 LDLRAD1Q5T700 205 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 FCRLBQ6BAA4 426 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 C1orf229Q6ZS94 237 aaPredicted RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 ZNF804AQ7Z570 1209 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 CCNJLQ8IV13 435 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 DIS3LQ8TF46 1054 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 DPF3Q92784 378 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 NXPE3Q969Y0 559 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 SPDL1Q96EA4 605 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 HOOK2Q96ED9 719 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 NRBF2Q96F24 287 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 SNF8Q96H20 258 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 C1orf74Q96LT6 269 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 APBA2Q99767 749 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 SPZ1Q9BXG8 430 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 LIN7BQ9HAP6 207 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 CLK4Q9HAZ1 481 aaKnown RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 LRRC4BQ9NT99 713 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 ATPIF1Q9UII2 106 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 FBXL5Q9UKA1 691 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 CORO1CQ9ULV4 474 aaPredicted RBP6.85□□□□□ -1.31
TDP1-215ENST00000556498 TMCO1Q9UM00 188 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 ATP11BQ9Y2G3 1177 aa6.85□□□□□ -1.31
TDP1-215ENST00000556498 RRBP1Q9P2E9 1410 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 EIF3AQ14152 1382 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 PTPRCP08575 1304 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 ATXN2Q99700 1313 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 E9PMD0 336 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 M0R2C6 588 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 WDR46O15213 610 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 NMT2O60551 498 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 RNF8O76064 485 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 CYP1A2P05177 515 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 CTSHP09668 335 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 PARP1P09874 1014 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 RPS2P15880 293 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 SLC8A1P32418 973 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 GNALP38405 381 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 CFAP157Q5JU67 520 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 KIAA1614Q5VZ46 1190 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
TDP1-215ENST00000556498 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
TDP1-215ENST00000556498 UNC5DQ6UXZ4 953 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms