RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 RNPC3Q96LT9 517 aaKnown RBP9.29□□□□□ -0.92
VTI1B-206ENST00000556461 AIFM3Q96NN9 605 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 IL23AQ9NPF7 189 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 JADE2Q9NQC1 790 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
VTI1B-206ENST00000556461 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 TPCN1Q9ULQ1 816 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 DOCK5Q9H7D0 1870 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 GSTTP1A0A1W2PQM5 241 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 GRXCR1A8MXD5 290 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 EDIL3O43854 480 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 SUPT20HL2P0C7V6 817 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 ARP10275 920 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 SCRN1Q12765 414 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 NEDD9Q14511 834 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 GPNMBQ14956 572 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 PTGISQ16647 500 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 UTP14CQ5TAP6 766 aaKnown RBP9.28□□□□□ -0.92
VTI1B-206ENST00000556461 RASIP1Q5U651 963 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 NLRX1Q86UT6 975 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 ZNF713Q8N859 430 aaPredicted RBP9.28□□□□□ -0.92
VTI1B-206ENST00000556461 GPRASP2Q96D09 838 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 IL17RAQ96F46 866 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 ZNF274Q96GC6 653 aaPredicted RBP9.28□□□□□ -0.92
VTI1B-206ENST00000556461 UIMC1Q96RL1 719 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 SENP7Q9BQF6 1050 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 MXRA8Q9BRK3 442 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
VTI1B-206ENST00000556461 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 MYH7BA7E2Y1 1941 aa9.28□□□□□ -0.92
VTI1B-206ENST00000556461 EYSQ5T1H1 3165 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 ESYT2A0FGR8 921 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 H3BRB1 525 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 NOP56O00567 594 aaKnown RBP9.27□□□□□ -0.93
VTI1B-206ENST00000556461 LARGE1O95461 756 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 FOSP01100 380 aaPredicted RBP9.27□□□□□ -0.93
VTI1B-206ENST00000556461 IQCF3P0C7M6 154 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 SREBF1P36956 1147 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 AK2P54819 239 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 ANAPC15P60006 121 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 ARHGAP4P98171 946 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 ITGB3BPQ13352 177 aaPredicted RBP9.27□□□□□ -0.93
VTI1B-206ENST00000556461 AP3B2Q13367 1082 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 MTMR1Q13613 665 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 TRIM71Q2Q1W2 868 aaKnown RBP9.27□□□□□ -0.93
VTI1B-206ENST00000556461 C8orf34Q49A92 452 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 OTOP2Q7RTS6 562 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 DEFB128Q7Z7B8 93 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 DEFB123Q8N688 67 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 C7orf31Q8N865 590 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 CRYGNQ8WXF5 182 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 FAM161BQ96MY7 647 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 KATNAL1Q9BW62 490 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 TUT1Q9H6E5 874 aaKnown RBP9.27□□□□□ -0.93
VTI1B-206ENST00000556461 KCNH7Q9NS40 1196 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
VTI1B-206ENST00000556461 A0A0C4DFX4 3053 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 IGLV3-22A0A075B6J6 115 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 FAM86B1E9PN63 330 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 MEIS1O00470 390 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 PFKFB2O60825 505 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 CTDNEP1O95476 244 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 FAM86B2P0C5J1 330 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 SMIM10L2BP0DMW5 78 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 HOXC8P31273 242 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 TCF7P36402 384 aaPredicted RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 PBX2P40425 430 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 SMAD3P84022 425 aaKnown RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 MBTPS1Q14703 1052 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 NPY5RQ15761 445 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 TCTN1Q2MV58 587 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 CEP55Q53EZ4 464 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 PSRC1Q6PGN9 363 aaPredicted RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 NECAB1Q8N987 351 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 HERVK_113Q902F9 699 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 CDHR1Q96JP9 859 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 GUCD1Q96NT3 240 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 PCYT2Q99447 389 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 GLT8D2Q9H1C3 349 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 RNPEPQ9H4A4 650 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 EHMT1Q9H9B1 1298 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 AGO4Q9HCK5 861 aaKnown RBP9.26□□□□□ -0.93
VTI1B-206ENST00000556461 C6orf50Q9HD87 102 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 MTMR10Q9NXD2 777 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 SCN5AQ14524 2016 aa9.26□□□□□ -0.93
VTI1B-206ENST00000556461 TET1Q8NFU7 2136 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 PITPNM1O00562 1244 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 TREHO43280 583 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 NBNO60934 754 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms