RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SLIT1O75093 1534 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 MEIS1O00470 390 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 SLC16A2P36021 539 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 EIF3BP55884 814 aaKnown RBP16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 SP4Q02446 784 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 FAM133BQ5BKY9 247 aaKnown RBP16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 MCUR1Q96AQ8 359 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 ATP6V1G3Q96LB4 118 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 TMEM47Q9BQJ4 181 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZNF18P17022 549 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 GUCY1A3Q02108 690 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 FOXP4Q8IVH2 680 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 PROM2Q8N271 834 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 SH2D3CQ8N5H7 860 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 ANKZF1Q9H8Y5 726 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 EIF3HO15372 352 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■□□ 17.4
ARHGEF40-207ENST00000556399 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 DR1Q01658 176 aa16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 RAB3IPQ96QF0 476 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-207ENST00000556399 TRIM37O94972 964 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 FGGP02679 453 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 MYL7Q01449 175 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 CHUKO15111 745 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 RUBCNQ92622 972 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 LRRIQ3A6PVS8 624 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 LRRN2O75325 713 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GCKP35557 465 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GUF1Q8N442 669 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZMYND12Q9H0C1 365 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GRID2IPA4D2P6 1211 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GRM4Q14833 912 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 WDR93Q6P2C0 686 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 KCTD1Q719H9 257 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 PPM1KQ8N3J5 372 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 RAD54LQ92698 747 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 CCSER1Q9C0I3 900 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
ARHGEF40-207ENST00000556399 GMNCA6NCL1 334 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 CDK8P49336 464 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 IRAK1P51617 712 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 PDXDC1Q6P996 788 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 GRK7Q8WTQ7 553 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 N4BP2L2Q92802 583 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 K7ENM7 598 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 RASSF2P50749 326 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZKSCAN8Q15776 578 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 TRIM68Q6AZZ1 485 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 FBXO11Q86XK2 927 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 SMARCAL1Q9NZC9 954 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 ORC4O43929 436 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 CORO7P57737 925 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 LRRC31Q6UY01 552 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 TBX2Q13207 712 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 ODR4Q5SWX8 454 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 TRAPPC11Q7Z392 1133 aa16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-207ENST00000556399 TTLL1O95922 423 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 ATF2P15336 505 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 KLK7P49862 253 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 NTRK3Q16288 839 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 CIB2O75838 187 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 PRPF6O94906 941 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 MAGOHP61326 146 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 COASYQ13057 564 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 FBXW10Q5XX13 1052 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 SLC44A5Q8NCS7 719 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 PSMD1Q99460 953 aa16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-207ENST00000556399 STK4Q13043 487 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms