RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SRGNP10124 158 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 TRAF1Q13077 416 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 ZNF713Q8N859 430 aaPredicted RBP16.33■□□□□ 0.2
NEK9-209ENST00000556170 CNKSR1Q969H4 720 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 PVALEFA0A1B0GWK0 134 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 STAT2P52630 851 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 LRRC63Q05C16 580 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 MMS19Q96T76 1030 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 DDTLA6NHG4 134 aaPredicted RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 NAA35Q5VZE5 725 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 PACSIN2Q9UNF0 486 aaPredicted RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 NDUFB10O96000 172 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 CASP8Q14790 479 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 TAX1BP1Q86VP1 789 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 CCDC170Q8IYT3 715 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
NEK9-209ENST00000556170 PDS5AQ29RF7 1337 aaKnown RBP16.32■□□□□ 0.2
NEK9-209ENST00000556170 TUBBP07437 444 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 FGRP09769 529 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 CTNNBL1Q8WYA6 563 aaPredicted RBP16.31■□□□□ 0.2
NEK9-209ENST00000556170 SEMA6BQ9H3T3 888 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 HYOU1Q9Y4L1 999 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 GOLGA6BA6NDN3 693 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 ERLIN2O94905 339 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
NEK9-209ENST00000556170 CFAP221Q4G0U5 840 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 CERS5Q8N5B7 392 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
NEK9-209ENST00000556170 LRRN2O75325 713 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 IL1R1P14778 569 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
NEK9-209ENST00000556170 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
NEK9-209ENST00000556170 CCDC127Q96BQ5 260 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 DISP2A7MBM2 1401 aa16.31■□□□□ 0.2
NEK9-209ENST00000556170 FOSP01100 380 aaPredicted RBP16.3■□□□□ 0.2
NEK9-209ENST00000556170 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
NEK9-209ENST00000556170 TMEM139Q8IV31 216 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 CCPG1Q9ULG6 757 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 SMIM23A6NLE4 172 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 BACH1O14867 736 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 TNFAIP3P21580 790 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 KIAA0895Q8NCT3 520 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 GNA14O95837 355 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
NEK9-209ENST00000556170 APBA1Q02410 837 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 CFAP58Q5T655 872 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 PEX26Q7Z412 305 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
NEK9-209ENST00000556170 ITIH6Q6UXX5 1313 aa16.3■□□□□ 0.2
NEK9-209ENST00000556170 DUSP9Q99956 384 aaKnown RBP16.29■□□□□ 0.2
NEK9-209ENST00000556170 ACTN1P12814 892 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
NEK9-209ENST00000556170 GUCY2DQ02846 1103 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 FLOT1O75955 427 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
NEK9-209ENST00000556170 GFPT2O94808 682 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
NEK9-209ENST00000556170 GJC1P36383 396 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 STAT1P42224 750 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 PDIA5Q14554 519 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 PNKPQ96T60 521 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 ZNF446Q9NWS9 450 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 JRKLQ9Y4A0 524 aa16.29■□□□□ 0.2
NEK9-209ENST00000556170 PSMD2Q13200 908 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 KRT12Q99456 494 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 TLDC2A0PJX2 215 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
NEK9-209ENST00000556170 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
NEK9-209ENST00000556170 SHMT1P34896 483 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 NT5C2P49902 561 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 SF3A3Q12874 501 aaKnown RBP eCLIP16.28■□□□□ 0.2
NEK9-209ENST00000556170 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 DNAAF5Q86Y56 855 aa16.28■□□□□ 0.2
NEK9-209ENST00000556170 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms