RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 LMNB2Q03252 620 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 RAD51AP2Q09MP3 1159 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 CDSNQ15517 529 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 KRT28Q7Z3Y7 464 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 KISS1RQ969F8 398 aaPredicted RBP4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 ZNF747Q9BV97 191 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 AK5Q9Y6K8 562 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 ATP7BP35670 1465 aa4.55□□□□□ -1.68
EFCAB11-210ENST00000556078 VCANP13611 3396 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 CUL9Q8IWT3 2517 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 KAT6BQ8WYB5 2073 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 F13A1P00488 732 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 ASGR2P07307 311 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 HSPA8P11142 646 aaKnown RBP4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 VAV1P15498 845 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 CTSKP43235 329 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 RBM25P49756 843 aaKnown RBP4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 FSTL1Q12841 308 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 CHRNA2Q15822 529 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 NAF1Q96HR8 494 aaKnown RBP4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 AP5S1Q9NUS5 200 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 SLC52A1Q9NWF4 448 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 SPATA6Q9NWH7 488 aaPredicted RBP4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 C11orf21Q9P2W6 132 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 MINPP1Q9UNW1 487 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 HS3ST3A1Q9Y663 406 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 NHSQ6T4R5 1651 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 LMO7Q8WWI1 1683 aa4.54□□□□□ -1.68
EFCAB11-210ENST00000556078 A0A1W2PQ27 194 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 A0A1W2PQ64 194 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 A0A1W2PQC6 194 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 A0A1W2PQD8 194 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 LDHBP07195 334 aaKnown RBP4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 MC3RP41968 323 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 KLF10Q13118 480 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 CAMK2GQ13555 558 aaPredicted RBP4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 HLA-DQA1Q5Y7H0 255 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 VPS11Q9H270 941 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 PDLIM7Q9NR12 457 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 PRR13Q9NZ81 148 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 OVOS2A0A0G2JMS6 1433 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 OVOS2A0A0J9YW53 1432 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 CCDC144AA2RUR9 1427 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 OVOS2Q6IE36 1432 aa4.53□□□□□ -1.68
EFCAB11-210ENST00000556078 PNPLA7Q6ZV29 1317 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 PIK3C2AO00443 1686 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 RAG1P15918 1043 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 ST13P50502 369 aaKnown RBP4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 CORO7P57737 925 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 KIAA2012Q0VF49 1180 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 RTP2Q5QGT7 225 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 TTLL7Q6ZT98 887 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 LGI4Q8N135 537 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 CPA5Q8WXQ8 436 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 CDK5RAP1Q96SZ6 601 aaKnown RBP4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 ANTXR1Q9H6X2 564 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 ST6GALNAC2Q9UJ37 374 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 NAIPQ13075 1403 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 RGPD5Q99666 1765 aa4.52□□□□□ -1.69
EFCAB11-210ENST00000556078 MEGF6O75095 1541 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 PXDNLA1KZ92 1463 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 F8W031 263 aaPredicted RBP4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 P4HBP07237 508 aaKnown RBP4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 CCNFP41002 786 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 CTCFP49711 727 aaPredicted RBP4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 ARSHQ5FYA8 562 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 HABP4Q5JVS0 413 aaKnown RBP4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 MEI1Q5TIA1 1274 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 BICRALQ6AI39 1079 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 GLB1LQ6UWU2 654 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 ZNF575Q86XF7 245 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 LINC00482Q8N8I6 264 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 NOX5Q96PH1 765 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 INVSQ9Y283 1065 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 EYSQ5T1H1 3165 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 SSH2Q76I76 1423 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 LTBP1Q14766 1721 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 USP54Q70EL1 1684 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 KIF13BQ9NQT8 1826 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 ARFGEF1Q9Y6D6 1849 aa4.51□□□□□ -1.69
EFCAB11-210ENST00000556078 LAMB4A4D0S4 1761 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 BRCA2P51587 3418 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 ERBINQ96RT1 1412 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 A0A1W2PQJ5 194 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 PF4P02776 101 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 FXR1P51114 621 aaKnown RBP eCLIP4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 MPP2Q14168 576 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 CDCP2Q5VXM1 449 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 REC114Q7Z4M0 266 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 JAMLQ86YT9 394 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 PMFBP1Q8TBY8 1022 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 ALG3Q92685 438 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 TSPAN17Q96FV3 270 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 LRPPRCP42704 1394 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms