RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 FAM205AQ6ZU69 1335 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 F8W031 263 aaPredicted RBP8.53□□□□□ -1.04
CHD8-209ENST00000555935 M0R2N6 131 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
CHD8-209ENST00000555935 USP11P51784 963 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 C10orf76Q5T2E6 689 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 HOOK3Q86VS8 718 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 SYNE4Q8N205 404 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 ARMC2Q8NEN0 867 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 OR2W6PQ8NHA6 318 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 SDR42E1Q8WUS8 393 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 PLIN2Q99541 437 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 SLITRK6Q9H5Y7 841 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD8-209ENST00000555935 C15orf41Q9Y2V0 281 aa8.53□□□□□ -1.04
CHD8-209ENST00000555935 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 PGRMC1O00264 195 aaKnown RBP8.52□□□□□ -1.04
CHD8-209ENST00000555935 KCNK3O14649 394 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 KIF4AO95239 1232 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 OR52Z1P0C646 297 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 DNA2P51530 1060 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 KRT71Q3SY84 523 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 TMC4Q7Z404 712 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 PROM2Q8N271 834 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.04
CHD8-209ENST00000555935 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.04
CHD8-209ENST00000555935 LRRC15Q8TF66 581 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 ANKS1AQ92625 1134 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 TSG101Q99816 390 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 RIC8AQ9NPQ8 531 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.04
CHD8-209ENST00000555935 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.04
CHD8-209ENST00000555935 MYH10P35580 1976 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 LIN7AO14910 233 aaPredicted RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 ADAMTS3O15072 1205 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD8-209ENST00000555935 PPP1R12BO60237 982 aaPredicted RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 ATP2C2O75185 946 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 RPSAP08865 295 aaKnown RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 KIAA0753Q2KHM9 967 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 FAM83BQ5T0W9 1011 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 NAIF1Q69YI7 327 aaPredicted RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 LRRC55Q6ZSA7 311 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 UNC13DQ70J99 1090 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 CCDC26Q8TAB7 109 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 SEC14L1Q92503 715 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 ZNF317Q96PQ6 595 aaPredicted RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 MOV10L1Q9BXT6 1211 aaKnown RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 NOP53Q9NZM5 478 aaKnown RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 TRMT112Q9UI30 125 aaKnown RBP8.52□□□□□ -1.05
CHD8-209ENST00000555935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD8-209ENST00000555935 ATP8B3O60423 1300 aa8.52□□□□□ -1.05
CHD8-209ENST00000555935 F8VZ95 297 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 SART1O43290 800 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 TLR2O60603 784 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 ALADP13716 330 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 KCNMA1Q12791 1236 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 MYO1EQ12965 1108 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 ZNF268Q14587 947 aaPredicted RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 TXNRD1Q16881 649 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 ACCSLQ4AC99 568 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 PIGWQ7Z7B1 504 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 CROCCP2Q86T23 111 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 TBC1D31Q96DN5 1066 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 STAMBPL1Q96FJ0 436 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 CALML4Q96GE6 196 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 SPAG5Q96R06 1193 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHD8-209ENST00000555935 RIOK1Q9BRS2 568 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 SLC39A2Q9NP94 309 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 HOMER3Q9NSC5 361 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 PCDHA6Q9UN73 950 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 TRPC6Q9Y210 931 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 PCDHA8Q9Y5H6 950 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 ADAMTSL3P82987 1691 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 GOLGA6L10A0A0M3HER8 536 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 FRMD3A2A2Y4 597 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 CEP104O60308 925 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 ZPR1O75312 459 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 NT5C2P49902 561 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 GNAQP50148 359 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 RNASE9P60153 205 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 SARNPP82979 210 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 ORC2Q13416 577 aaPredicted RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 INF2Q27J81 1249 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 TBC1D5Q92609 795 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 TANGO6Q9C0B7 1094 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 NEUROG2Q9H2A3 272 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 CCDC134Q9H6E4 229 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 SPATS2LQ9NUQ6 558 aaKnown RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 AIPL1Q9NZN9 384 aa8.51□□□□□ -1.05
CHD8-209ENST00000555935 SAMD15Q9P1V8 674 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms