RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 KIAA1217Q5T5P2 1943 aa9.79□□□□□ -0.84
NEK9-206ENST00000555537 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
NEK9-206ENST00000555537 PIEZO1Q92508 2521 aa9.79□□□□□ -0.84
NEK9-206ENST00000555537 H3BRB1 525 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 NCK2O43639 380 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 RB1P06400 928 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 HSPD1P10809 573 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 HOXD8P13378 290 aaPredicted RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 VCPP55072 806 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 ZXDAP98168 799 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 SMAD4Q13485 552 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 CAMK1Q14012 370 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 MCF2L2Q86YR7 1114 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 MIER1Q8N108 512 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 IL31RAQ8NI17 732 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 TUT1Q9H6E5 874 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 MLXIPQ9HAP2 919 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 MRPL11Q9Y3B7 192 aaKnown RBP9.78□□□□□ -0.84
NEK9-206ENST00000555537 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
NEK9-206ENST00000555537 TRIOO75962 3097 aa9.77□□□□□ -0.84
NEK9-206ENST00000555537 A0A0D9SFI3 127 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 C5orf67F2Z3F1 127 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 ENPP3O14638 875 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 OPLAHO14841 1288 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 DHX16O60231 1041 aaKnown RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 GFRA3O60609 400 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 UBA1P22314 1058 aaKnown RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 DNAJB1P25685 340 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 HOXA13P31271 388 aaPredicted RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 NDUFV1P49821 464 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 RRP1P56182 461 aaKnown RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 ADGRD2Q7Z7M1 963 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 RBM23Q86U06 439 aaKnown RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 TBC1D10CQ8IV04 446 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 MSLNLQ96KJ4 702 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 PDCD2LQ9BRP1 358 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 C11orf84Q9BUA3 381 aaPredicted RBP9.77□□□□□ -0.85
NEK9-206ENST00000555537 JMJD4Q9H9V9 463 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 CLEC1BQ9P126 229 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 PLAGL2Q9UPG8 496 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 ZNF318Q5VUA4 2279 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 TECTAO75443 2155 aa9.77□□□□□ -0.85
NEK9-206ENST00000555537 MYO7AQ13402 2215 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 CHRNA1P02708 482 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 LGALS2P05162 132 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 GHRP10912 638 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 MX1P20591 662 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 HOXC8P31273 242 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 HSD17B4P51659 736 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 RBM10P98175 930 aaKnown RBP9.76□□□□□ -0.85
NEK9-206ENST00000555537 BTG3Q14201 252 aaPredicted RBP9.76□□□□□ -0.85
NEK9-206ENST00000555537 PGM5Q15124 567 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 MCMDC2Q4G0Z9 681 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 ZNF589Q86UQ0 364 aaPredicted RBP9.76□□□□□ -0.85
NEK9-206ENST00000555537 VSIG10LQ86VR7 867 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 FBXL6Q8N531 539 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
NEK9-206ENST00000555537 RPGRIP1Q96KN7 1286 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 LMAN2LQ9H0V9 348 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 HELLSQ9NRZ9 838 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 PCDHGC5Q9Y5F6 944 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 NEDD4P46934 1319 aa9.76□□□□□ -0.85
NEK9-206ENST00000555537 LOC730098B7Z3J9 87 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 H0Y858 1186 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 PPP1R11O60927 126 aaPredicted RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 EYA4O95677 639 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 AVPR2P30518 371 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 ARHGAP4P98171 946 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 FAM26DQ5JW98 314 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 KCNV1Q6PIU1 500 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 RUFY4Q6ZNE9 571 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 STOX1Q6ZVD7 989 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 SPPL3Q8TCT6 385 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 APBB2Q92870 758 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 CLP1Q92989 425 aaKnown RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 EVI5LQ96CN4 794 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 ZNF689Q96CS4 500 aaPredicted RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 RC3H2Q9HBD1 1191 aaKnown RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 TLR9Q9NR96 1032 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 RTEL1Q9NZ71 1219 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 BARX2Q9UMQ3 279 aaPredicted RBP9.75□□□□□ -0.85
NEK9-206ENST00000555537 PCDHB15Q9Y5E8 787 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 ADGRA3Q8IWK6 1321 aa9.75□□□□□ -0.85
NEK9-206ENST00000555537 RALGAPA2Q2PPJ7 1873 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 PER2O15055 1255 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms