RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 STAG1Q8WVM7 1258 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 SEC14L1Q92503 715 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 SMURF1Q9HCE7 757 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 THG1LQ9NWX6 298 aaKnown RBP7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 PHLDB1Q86UU1 1377 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 H7C1D1 291 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 NKRFO15226 690 aaKnown RBP eCLIP7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 AMY2AP04746 511 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 ATP2A2P16615 1042 aaKnown RBP7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 AMY2BP19961 511 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 ADCYAP1R1P41586 468 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 GUCY2FP51841 1108 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 EVA1CP58658 441 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 EXOSC10Q01780 885 aaKnown RBP7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 PTRH1Q86Y79 214 aaKnown RBP7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 SHISA4Q96DD7 197 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 GPR101Q96P66 508 aaPredicted RBP7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 SMOC1Q9H4F8 434 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 SLC5A4Q9NY91 659 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 SRPK3Q9UPE1 567 aa7.43□□□□□ -1.22
CKS1BP1-201ENST00000555221 HYAL3O43820 417 aaPredicted RBP7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 HIP1RO75146 1068 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 EFEMP2O95967 443 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 CYBBP04839 570 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 TMPRSS15P98073 1019 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 IRF9Q00978 393 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 PLEKHG6Q3KR16 790 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 ATP13A4Q4VNC1 1196 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 EFHBQ8N7U6 833 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 CHTF18Q8WVB6 975 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 PEX11GQ96HA9 241 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 PUS7LQ9H0K6 701 aaKnown RBP7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
CKS1BP1-201ENST00000555221 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 MAN2B1O00754 1011 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 ULK1O75385 1050 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 TADA3O75528 432 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 KRT37O76014 449 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 S100BP04271 92 aaPredicted RBP7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 DBHP09172 617 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 FAPQ12884 760 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 NR1I3Q14994 352 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 ZNF174Q15697 407 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 BRDTQ58F21 947 aaPredicted RBP7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 PAQR3Q6TCH7 311 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 KCTD1Q719H9 257 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 PASD1Q8IV76 773 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 TRIM48Q8IWZ4 208 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 ABI1Q8IZP0 508 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 SH3RF2Q8TEC5 729 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 RNF32Q9H0A6 362 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 EMC7Q9NPA0 242 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 OXSMQ9NWU1 459 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 MYOTQ9UBF9 498 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 ATP23Q9Y6H3 246 aa7.41□□□□□ -1.22
CKS1BP1-201ENST00000555221 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 CLASP2O75122 1294 aaKnown RBP7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 MPOP05164 745 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 YBX3P16989 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 GJA4P35212 333 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 ID4P47928 161 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 ERVFRD-1P60508 538 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 NOSTRINQ8IVI9 506 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 SIRT2Q8IXJ6 389 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 KIRREL1Q96J84 757 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 PCIF1Q9H4Z3 704 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 SPTLC3Q9NUV7 552 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 WASHC2CQ9Y4E1 1318 aa7.4□□□□□ -1.22
CKS1BP1-201ENST00000555221 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 ZBTB48P10074 688 aaPredicted RBP7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 EPHA5P54756 1037 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 GP2P55259 537 aaKnown RBP7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 TMEM62Q0P6H9 643 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 SLC9A5Q14940 896 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 CREB3L3Q68CJ9 461 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 IQSEC1Q6DN90 963 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 ATG4DQ86TL0 474 aaPredicted RBP7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 CD244Q9BZW8 370 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 SLC6A17Q9H1V8 727 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 ASH2LQ9UBL3 628 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 SPO11Q9Y5K1 396 aa7.39□□□□□ -1.23
CKS1BP1-201ENST00000555221 F8W031 263 aaPredicted RBP7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 KCNK3O14649 394 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 SLC27A2O14975 620 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 GALK1P51570 392 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 SESN3P58005 492 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 TUSC3Q13454 348 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 ARTNQ5T4W7 220 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 MILR1Q7Z6M3 343 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 KIAA1958Q8N8K9 716 aa7.38□□□□□ -1.23
CKS1BP1-201ENST00000555221 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms