RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 CHGBP05060 677 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 PCCAP05165 728 aaPredicted RBP3.9□□□□□ -1.79
SEC23A-208ENST00000555017 MMP10P09238 476 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 VAMP1P23763 118 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 RBM25P49756 843 aaKnown RBP3.9□□□□□ -1.79
SEC23A-208ENST00000555017 NEXNQ0ZGT2 675 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 ARSHQ5FYA8 562 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 TMEM201Q5SNT2 666 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 ANKRD45Q5TZF3 282 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 PRR5LQ6MZQ0 368 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 ARHGAP27Q6ZUM4 889 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 NT5DC4Q86YG4 428 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 FLCNQ8NFG4 579 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 TTLL11Q8NHH1 800 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 CELF1Q92879 486 aaKnown RBP3.9□□□□□ -1.79
SEC23A-208ENST00000555017 NKD1Q969G9 470 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 HSPA12BQ96MM6 686 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 UTP14AQ9BVJ6 771 aaKnown RBP3.9□□□□□ -1.79
SEC23A-208ENST00000555017 NT5C1AQ9BXI3 368 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 LRRC3Q9BY71 257 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 LNPKQ9C0E8 428 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 TNKS2Q9H2K2 1166 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 GREM2Q9H772 168 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 PRDM5Q9NQX1 630 aaPredicted RBP3.9□□□□□ -1.79
SEC23A-208ENST00000555017 SEMA3GQ9NS98 782 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 ADAM30Q9UKF2 790 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 ADAMTS6Q9UKP5 1117 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 CEP131Q9UPN4 1083 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 TACC3Q9Y6A5 838 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 NRXN2Q9P2S2 1712 aa3.9□□□□□ -1.79
SEC23A-208ENST00000555017 IGF2BP3O00425 579 aaKnown RBP eCLIP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 SCAMP3O14828 347 aaKnown RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 SURF6O75683 361 aaKnown RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 UBOX5O94941 541 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 KLRK1P26718 216 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ADORA1P30542 326 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 PDE4BQ07343 736 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 TNK2Q07912 1038 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 RAD51AP2Q09MP3 1159 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 APOBRQ0VD83 1088 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 TFCP2Q12800 502 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 PAK2Q13177 524 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CPSF6Q16630 551 aaKnown RBP eCLIP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 IFI16Q16666 785 aaKnown RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 SFRP5Q5T4F7 317 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 OVOS1Q6IE37 1185 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 RUFY4Q6ZNE9 571 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ATG9AQ7Z3C6 839 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 NBPF5PQ86XG9 351 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 KIAA0825Q8IV33 1275 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 SLITRK4Q8IW52 837 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 TP53INP2Q8IXH6 220 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ZBTB38Q8NAP3 1195 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CCDC191Q8NCU4 936 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 SSH3Q8TE77 659 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ZNF512BQ96KM6 892 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CCDC8Q9H0W5 538 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ACBD3Q9H3P7 528 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 DCTPP1Q9H773 170 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ATP13A1Q9HD20 1204 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ADGRE2Q9UHX3 823 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 PPT2Q9UMR5 302 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 ST14Q9Y5Y6 855 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CAPN6Q9Y6Q1 641 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CHD4Q14839 1912 aa3.89□□□□□ -1.79
SEC23A-208ENST00000555017 CCDC88AQ3V6T2 1871 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 AK9Q5TCS8 1911 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 A0A0G2JLW4 131 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 SHISA3A0PJX4 238 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 CSF1RP07333 972 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 GNAI3P08754 354 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 CTSWP56202 376 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 TIMM10P62072 90 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 PRKCQQ04759 706 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 HDAC1Q13547 482 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 RABL6Q3YEC7 729 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 CCDC81Q6ZN84 652 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 NPM2Q86SE8 214 aaKnown RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 RPAP2Q8IXW5 612 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 SMC5Q8IY18 1101 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 EAF2Q96CJ1 260 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 ATG4CQ96DT6 458 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 EDC3Q96F86 508 aaKnown RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 RWDD1Q9H446 243 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 EHMT1Q9H9B1 1298 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 METTL5Q9NRN9 209 aaKnown RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 GINM1Q9NU53 330 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 ZSWIM5Q9P217 1185 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 PPP1R1BQ9UD71 204 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-208ENST00000555017 GTF2IRD1Q9UHL9 959 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 MINPP1Q9UNW1 487 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 JAG2Q9Y219 1238 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 SLC5A6Q9Y289 635 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 SH3TC1Q8TE82 1336 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 CDHR2Q9BYE9 1310 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 PITPNM2Q9BZ72 1349 aa3.88□□□□□ -1.79
SEC23A-208ENST00000555017 AKAP11Q9UKA4 1901 aa3.87□□□□□ -1.79
SEC23A-208ENST00000555017 RIC1Q4ADV7 1423 aa3.87□□□□□ -1.79
SEC23A-208ENST00000555017 ADAMTSL1Q8N6G6 1762 aa3.87□□□□□ -1.79
SEC23A-208ENST00000555017 PDE8AO60658 829 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms