RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SYT10Q6XYQ8 523 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 VSIG1Q86XK7 387 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 FAM114A1Q8IWE2 563 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 NEK9Q8TD19 979 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SH3TC2Q8TF17 1288 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 NELFBQ8WX92 580 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 C12orf42Q96LP6 360 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SLC26A6Q9BXS9 759 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 GNL3LQ9NVN8 582 aaKnown RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SEL1LQ9UBV2 794 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 PCYOX1Q9UHG3 505 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CNOT7Q9UIV1 285 aaKnown RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 EPN1Q9Y6I3 576 aaPredicted RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 DENND4CQ5VZ89 1909 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 KIAA1549LQ6ZVL6 1849 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 GOLGA6L19H0YKK7 550 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 DHX15O43143 795 aaKnown RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 FAM189A1O60320 539 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 ATG7O95352 703 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 RPA1P27694 616 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 HIBADHP31937 336 aaKnown RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CASP14P31944 242 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CDH5P33151 784 aaPredicted RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 LMOD2Q6P5Q4 547 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 DRICH1Q6PGQ1 229 aaPredicted RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 C1orf186Q6ZWK4 172 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 HDXQ7Z353 690 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 STAG2Q8N3U4 1231 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 TBC1D16Q8TBP0 767 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 DHRS4Q9BTZ2 278 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 ADAM7Q9H2U9 754 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 CD209Q9NNX6 404 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 SSU72Q9NP77 194 aaKnown RBP3.84□□□□□ -1.79
SEC23A-207ENST00000554615 TMEM51Q9NW97 253 aa3.84□□□□□ -1.79
SEC23A-207ENST00000554615 ZNF487B1APH4 448 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 EPHB6O15197 1021 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 GGPS1O95749 300 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 SERPING1P05155 500 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 VIL1P09327 827 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 GTF2H1P32780 548 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 CLCN2P51788 898 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 ITGB3BPQ13352 177 aaPredicted RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 PPP2R5AQ15172 486 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 TPD52L1Q16890 204 aaPredicted RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 GLIPR1L2Q4G1C9 344 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 GPATCH4Q5T3I0 446 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 IFIT1BQ5T764 474 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 OLFM4Q6UX06 510 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 LBX2Q6XYB7 198 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 LIMS2Q7Z4I7 341 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 ANKS4BQ8N8V4 417 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 PRPF38AQ8NAV1 312 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC12Q8WUD4 166 aaPredicted RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 USP6NLQ92738 828 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 ARHGEF1Q92888 912 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 FAM20AQ96MK3 541 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 C17orf75Q9HAS0 396 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 LGALS13Q9UHV8 139 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 KCNJ14Q9UNX9 436 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 TBC1D30Q9Y2I9 924 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 SSUH2Q9Y2M2 353 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 DAGLAQ9Y4D2 1042 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 BZW2Q9Y6E2 419 aaKnown RBP3.84□□□□□ -1.8
SEC23A-207ENST00000554615 CNTNAP2Q9UHC6 1331 aa3.84□□□□□ -1.8
SEC23A-207ENST00000554615 LOC102724159A0A0B4J2E5 919 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 WTIPA6NIX2 430 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CYP11B2P19099 503 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CYP7A1P22680 504 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PEX5P50542 639 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF132P52740 706 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 VSNL1P62760 191 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 KRT83P78385 493 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC15Q0P6D6 951 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 GIT2Q14161 759 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PWP2Q15269 919 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 UAP1Q16222 522 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 DDB1Q16531 1140 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SLC18A3Q16572 532 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 DACT2Q5SW24 774 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ARTNQ5T4W7 220 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CHST3Q7LGC8 479 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 BNIPLQ7Z465 357 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NEK8Q86SG6 692 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SRLQ86TD4 932 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SMCR8Q8TEV9 937 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SCFD1Q8WVM8 642 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 P3H4Q92791 437 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 FAM212AQ96EL1 285 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC17Q96LX7 622 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 C16orf45Q96MC5 204 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PSMD1Q99460 953 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NHEJ1Q9H9Q4 299 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 EFCC1Q9HA90 598 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CYLDQ9NQC7 956 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 POLLQ9UGP5 575 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ODF2LQ9ULJ1 636 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 GOLGA8KD6RF30 607 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms