RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RNF139Q8WU17 664 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RGL1Q9NZL6 768 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 AKAP2Q9Y2D5 859 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CTAGE15A4D2H0 777 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ATP2A1O14983 1001 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 HMGB3O15347 200 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TIPRLO75663 272 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SCGNO76038 276 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CTAGE8P0CG41 777 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PITRM1Q5JRX3 1037 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CTAGE4Q8IX94 777 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RSAD2Q8WXG1 361 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SLC10A4Q96EP9 437 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 NOC4LQ9BVI4 516 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RNF41Q9H4P4 317 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 OGFRQ9NZT2 677 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SERTAD1Q9UHV2 236 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SNAPC4Q5SXM2 1469 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SDK2Q58EX2 2172 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TNPO2O14787 897 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PPFIA4O75335 1185 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DARSP14868 501 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 FGFR4P22455 802 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DPY19L2Q6NUT2 758 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 HEXIM2Q96MH2 286 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 GBP5Q96PP8 586 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MRPL44Q9H9J2 332 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TRAF3IP3Q9Y228 551 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RIPOR2Q9Y4F9 1068 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 BRD1O95696 1058 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RSBN1LQ6PCB5 846 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 LRGUKQ96M69 825 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PARVBQ9HBI1 364 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SLC39A2Q9NP94 309 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 NR1I2O75469 434 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SYT1P21579 422 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 GPR1P46091 355 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF165P49910 485 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SKOR1P84550 965 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 E2F5Q15329 346 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CYP4F22Q6NT55 531 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MOB2Q70IA6 237 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 COMMD2Q86X83 199 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TEX9Q8N6V9 391 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MYH9P35579 1960 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 GCNT3O95395 438 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CIITAP33076 1130 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 STAT3P40763 770 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ADCY7P51828 1080 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 BASP1P80723 227 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ALDH6A1Q02252 535 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 C7orf57Q8NEG2 295 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 HSPH1Q92598 858 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZFP42Q96MM3 310 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RHBGQ9H310 441 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PAG1Q9NWQ8 432 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SENP1Q9P0U3 644 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TEKT2Q9UIF3 430 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 YARS2Q9Y2Z4 477 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SNRPA1P09661 255 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 STMN1P16949 149 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ITGA6P23229 1130 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CARSP49589 748 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RNASE11Q8TAA1 199 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 FAM71BQ8TC56 605 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DYDC2Q96IM9 177 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC163A0A0D9SF12 145 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MEFVO15553 781 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 KRT3P12035 628 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 FUT4P22083 530 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SLCO1A2P46721 670 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RPS6P62753 249 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 LACTBP83111 547 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PDE1BQ01064 536 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PDCD2Q16342 344 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CEP128Q6ZU80 1094 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SND1Q7KZF4 910 aaKnown RBP eCLIP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 HDXQ7Z353 690 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 VSIG1Q86XK7 387 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PIK3CAP42336 1068 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 FNTAP49354 379 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 KRT32Q14532 448 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TAF13Q15543 124 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CNGA2Q16280 664 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC138Q96M89 665 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TLR7Q9NYK1 1049 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCPG1Q9ULG6 757 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 HEATR1Q9H583 2144 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 IMPDH2P12268 514 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DDX25Q9UHL0 483 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SLC9A8Q9Y2E8 581 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RNMTO43148 476 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SLURP2P0DP57 97 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MESDQ14696 234 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 IFI16Q16666 785 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CYFIP1Q7L576 1253 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 GPBP1Q86WP2 473 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms