RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 GBF1Q92538 1859 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 UMODL1Q5DID0 1318 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 GOLGA8AA7E2F4 631 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 GOLGA8BA8MQT2 603 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 SPATA31C2B4DYI2 1134 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 HAS3O00219 553 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 PSMA5P28066 241 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 FGD1P98174 961 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 NEDD9Q14511 834 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 C16orf59Q7L2K0 433 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 JAKMIP1Q96N16 626 aaKnown RBP11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 WNT8AQ9H1J5 351 aa11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
PTCD2P1-201ENST00000554393 KAT6AQ92794 2004 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 RPS6KB1P23443 525 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 RFC2P35250 354 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 PSEN2P49810 448 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 SP2Q02086 613 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 RBL2Q08999 1139 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 HSDL1Q3SXM5 330 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZNF697Q5TEC3 545 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 WWC2Q6AWC2 1192 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 METTL7BQ6UX53 244 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 NLRX1Q86UT6 975 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 CCDC82Q8N4S0 544 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 HERVK_113Q902F9 699 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 GPRASP2Q96D09 838 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 SENP7Q9BQF6 1050 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 GLT8D2Q9H1C3 349 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 MLXIPQ9HAP2 919 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
PTCD2P1-201ENST00000554393 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZNF286BP0CG31 522 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 CYP2C9P11712 490 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 CDC27P30260 824 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 METAP2P50579 478 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 CCL23P55773 120 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 EVCP57679 992 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 BFSP2Q13515 415 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 MFSD10Q14728 455 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 PTGISQ16647 500 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 Q6ZUG5 572 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 C7orf31Q8N865 590 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 BRF1Q92994 677 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 CDH23Q9H251 3354 aa11.94□□□□□ -0.5
PTCD2P1-201ENST00000554393 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 MAFGO15525 162 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 FOSP01100 380 aaPredicted RBP11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 FGBP02675 491 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 ACRP10323 421 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 CPA1P15085 419 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 ADCY7P51828 1080 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 NAPAP54920 295 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 AP3B2Q13367 1082 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 UBE2SQ16763 222 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 KIAA0753Q2KHM9 967 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 RETREG2Q8NC44 543 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 SYMPKQ92797 1274 aaKnown RBP11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 SNX27Q96L92 541 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 CTAGE1Q96RT6 745 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 C16orf70Q9BSU1 422 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 USP26Q9BXU7 913 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
PTCD2P1-201ENST00000554393 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 STXBP3O00186 592 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 LGALS2P05162 132 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 IQCF3P0C7M6 154 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 HOXC8P31273 242 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms