RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
PPFIA2-227ENST00000552948 TDP2O95551 362 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 SCP2P22307 547 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ELF1P32519 619 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 KSR1Q8IVT5 923 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 IQCKQ8N0W5 287 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 HVCN1Q96D96 273 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 SEC16BQ96JE7 1060 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 C7orf25Q9BPX7 421 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 STK38LQ9Y2H1 464 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 EPB41P11171 864 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 PLTPP55058 493 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ALKBH5Q6P6C2 394 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ATRNO75882 1429 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 KCNQ4P56696 695 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 LRRC63Q05C16 580 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 MTMR3Q13615 1198 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 PARP10Q53GL7 1025 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 FIGNQ5HY92 759 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 CEP72Q9P209 647 aa12.68□□□□□ -0.38
PPFIA2-227ENST00000552948 GOLGA6L10A0A0M3HER8 536 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 TTI1O43156 1089 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 KLRK1P26718 216 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 CYB5D1Q6P9G0 228 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 GPBP1Q86WP2 473 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 GUF1Q8N442 669 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 EYA3Q99504 573 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 ELAC2Q9BQ52 826 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 KCNK9Q9NPC2 374 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 SIK3Q9Y2K2 1263 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 FLOT1O75955 427 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 H2AFZP0C0S5 128 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 COPB2P35606 906 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 PEX19P40855 299 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 CDK17Q00537 523 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 CENPPQ6IPU0 288 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 DDX20Q9UHI6 824 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 C5P01031 1676 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 EIF4E1BA6NMX2 242 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 RGS16O15492 202 aaPredicted RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 FSBPO95073 299 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 NR2F2P24468 414 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 PICALMQ13492 652 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 UBE2SQ16763 222 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 AEBP2Q6ZN18 517 aaPredicted RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 NSUN4Q96CB9 384 aaKnown RBP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 MYH10P35580 1976 aa12.67□□□□□ -0.38
PPFIA2-227ENST00000552948 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 STXBP3O00186 592 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 ORC4O43929 436 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 SMTNP53814 917 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 NAB2Q15742 525 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 CELF1Q92879 486 aaKnown RBP12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 THOC1Q96FV9 657 aaKnown RBP12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 TRIM51Q9BSJ1 452 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 PNMA2Q9UL42 364 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 PCDHA12Q9UN75 941 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 NOC2LQ9Y3T9 749 aaKnown RBP12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 KIF4AO95239 1232 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
PPFIA2-227ENST00000552948 FGGP02679 453 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms