RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 THPOP40225 353 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 SEPT8Q92599 483 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 TBC1D5Q92609 795 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 ASIC4Q96FT7 647 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 IWS1Q96ST2 819 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 TMEM47Q9BQJ4 181 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 RC3H2Q9HBD1 1191 aaKnown RBP13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 ANAPC4Q9UJX5 808 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 MYO10Q9HD67 2058 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 PPFIA4O75335 1185 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 UPP2O95045 317 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 PDHBP11177 359 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 TOP1P11387 765 aaKnown RBP13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 AVPR2P30518 371 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 CTNNB1P35222 781 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 VCPP55072 806 aaKnown RBP13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 SIGLEC14Q08ET2 396 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 STXBP2Q15833 593 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 SYTL5Q8TDW5 730 aaPredicted RBP13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 NSUN6Q8TEA1 469 aaKnown RBP13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 IL17RAQ96F46 866 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 CLEC1BQ9P126 229 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 MYH6P13533 1939 aa13.35□□□□□ -0.27
SUPT16H-202ENST00000552829 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 MYSM1Q5VVJ2 828 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 SMRP1Q8NCR6 262 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 C16orf70Q9BSU1 422 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
SUPT16H-202ENST00000552829 ZNF292O60281 2723 aa13.33□□□□□ -0.27
SUPT16H-202ENST00000552829 CAND2O75155 1236 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 MMP1P03956 469 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 COASYQ13057 564 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 ASCL5Q7RTU5 278 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 ERMP1Q7Z2K6 904 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 ATOH1Q92858 354 aaPredicted RBP13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 IGFLR1Q9H665 355 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 KIAA1671Q9BY89 1806 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 DMDP11532 3685 aa13.33□□□□□ -0.28
SUPT16H-202ENST00000552829 RGS20O76081 388 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 NUBP1P53384 320 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 FAM26DQ5JW98 314 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 TSHZ3Q63HK5 1081 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 EFHBQ8N7U6 833 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 APBB2Q92870 758 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 ATP6V0A1Q93050 837 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 ZNF689Q96CS4 500 aaPredicted RBP13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
SUPT16H-202ENST00000552829 TREHO43280 583 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 NR3C2P08235 984 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 DNAJB1P25685 340 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 ALX1Q15699 326 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 USH1GQ495M9 461 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 P2RX5Q93086 422 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 ADGRA3Q8IWK6 1321 aa13.31□□□□□ -0.28
SUPT16H-202ENST00000552829 EP300Q09472 2414 aaPredicted RBP13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 PRR23AA6NEV1 266 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 GLP2RO95838 553 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 MS4A1P11836 297 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 ICAM3P32942 547 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 NDUFV1P49821 464 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 ADAM17P78536 824 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 TTC14Q96N46 770 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 PXMP2Q9NR77 195 aa13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
SUPT16H-202ENST00000552829 ABCB11O95342 1321 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms