RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SV2BQ7L1I2 683 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 ANKRD13AQ8IZ07 590 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 FAM43AQ8N2R8 423 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 FEZ1Q99689 392 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-216ENST00000552800 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-216ENST00000552800 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 UBIAD1Q9Y5Z9 338 aa11.02□□□□□ -0.65
TMEM116-216ENST00000552800 LOC285556D6RIA3 1793 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 A0A0G2JLL6 359 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 FRMD3A2A2Y4 597 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 ZNF500O60304 480 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 STAM2O75886 525 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 IREB2P48200 963 aaKnown RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 USH1GQ495M9 461 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 CDKAL1Q5VV42 579 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 UNC13DQ70J99 1090 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 APTXQ7Z2E3 356 aaKnown RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 LARP4BQ92615 738 aaKnown RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 RAD54LQ92698 747 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 DHTKD1Q96HY7 919 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-216ENST00000552800 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 MXRA8Q9BRK3 442 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 CCPG1Q9ULG6 757 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
TMEM116-216ENST00000552800 LOC102724159A0A0B4J2E5 919 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 PP2D1A8MPX8 630 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 GOLGA6L6A8MZA4 724 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 ESPNB1AK53 854 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 BIN1O00499 593 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 FLOT1O75955 427 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 LYPLA2O95372 231 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 SPATA31C1P0DKV0 1188 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
TMEM116-216ENST00000552800 AFMP43652 599 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 SNAP25P60880 206 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 FKBP1BP68106 108 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 VGLL4Q14135 290 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 HIC1Q14526 733 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 PWP2Q15269 919 aaKnown RBP11□□□□□ -0.65
TMEM116-216ENST00000552800 HAUS3Q68CZ6 603 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 ILDR2Q71H61 639 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 CCDC84Q86UT8 332 aaPredicted RBP11□□□□□ -0.65
TMEM116-216ENST00000552800 AOPEPQ8N6M6 819 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 SYT2Q8N9I0 419 aaPredicted RBP11□□□□□ -0.65
TMEM116-216ENST00000552800 CHST13Q8NET6 341 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 TRIM5Q9C035 493 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 JADE2Q9NQC1 790 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 KCND1Q9NSA2 647 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 SLC45A1Q9Y2W3 748 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 A0A0G2JMZ2 1700 aa11□□□□□ -0.65
TMEM116-216ENST00000552800 RBBP6Q7Z6E9 1792 aaKnown RBP10.99□□□□□ -0.65
TMEM116-216ENST00000552800 DHX15O43143 795 aaKnown RBP10.99□□□□□ -0.65
TMEM116-216ENST00000552800 CBFA2T2O43439 604 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 RAD21O60216 631 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 CFBP00751 764 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 NF2P35240 595 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 SLC12A3P55017 1021 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 FANCCQ00597 558 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.65
TMEM116-216ENST00000552800 PPIL2Q13356 520 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 MOGSQ13724 837 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 NR1I3Q14994 352 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 ECM1Q16610 540 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 VSIG10LQ86VR7 867 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 GRAMD1CQ8IYS0 662 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 ERMNQ8TAM6 284 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 NEK9Q8TD19 979 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 NOC3LQ8WTT2 800 aaKnown RBP10.99□□□□□ -0.65
TMEM116-216ENST00000552800 TMEM174Q8WUU8 243 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 FANCLQ9NW38 375 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 KCND2Q9NZV8 630 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 COL20A1Q9P218 1284 aa10.99□□□□□ -0.65
TMEM116-216ENST00000552800 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
TMEM116-216ENST00000552800 COL11A1P12107 1806 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-216ENST00000552800 LOXHD1Q8IVV2 1947 aa10.98□□□□□ -0.65
TMEM116-216ENST00000552800 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms