RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ZNF215Q9UL58 517 aaPredicted RBP6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 ASAP1Q9ULH1 1129 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 MYH7P12883 1935 aa6.81□□□□□ -1.32
CHMP4A-210ENST00000552620 AKAP11Q9UKA4 1901 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 A0A087WWV3 80 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 ADARB2-AS1A8MUL3 147 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 ARHGAP6O43182 974 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 ATP8B1O43520 1251 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 STX10O60499 249 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 BMP15O95972 392 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 MMP1P03956 469 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 CELA3AP09093 270 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 C4AP0C0L4 1744 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 C4BP0C0L5 1744 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 TOP1P11387 765 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 PCP11498 1178 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 XBP1P17861 261 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 PHKA1P46020 1223 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 SARSP49591 514 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 RPS26P62854 115 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 MAP3K10Q02779 954 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 BMS1Q14692 1282 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 WTAPQ15007 396 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 LONRF3Q496Y0 759 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 TTBK2Q6IQ55 1244 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 HOMER1Q86YM7 354 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 RAB11FIP4Q86YS3 637 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 NOSTRINQ8IVI9 506 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 ZNF34Q8IZ26 560 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 KRT222Q8N1A0 295 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 CACTIN-AS1Q8N1I8 211 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 RASGRP4Q8TDF6 673 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 ERCC4Q92889 916 aaPredicted RBP6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.8□□□□□ -1.322e-7■□□□□ 9.5
CHMP4A-210ENST00000552620 HSD3B7Q9H2F3 369 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 GJB4Q9NTQ9 266 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 FRRS1LQ9P0K9 344 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 PCDHA5Q9Y5H7 936 aa6.8□□□□□ -1.32
CHMP4A-210ENST00000552620 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.8□□□□□ -1.321e-6■■■■□ 19.4
CHMP4A-210ENST00000552620 UBN2Q6ZU65 1347 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 GSG1L2A8MUP6 293 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 RANBP6O60518 1105 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 H2AFXP16104 143 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 ALAS2P22557 587 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 GPTP24298 496 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 GMPRP36959 345 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 TUBB4BP68371 445 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 INSM1Q01101 510 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 AKAP17AQ02040 695 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 TBX2Q13207 712 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PNOCQ13519 176 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 TUBB2AQ13885 445 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MORC3Q14149 939 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 POSTNQ15063 836 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PARP10Q53GL7 1025 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SNAP47Q5SQN1 464 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 TAF3Q5VWG9 929 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SYT10Q6XYQ8 523 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MICU3Q86XE3 530 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 FOXP4Q8IVH2 680 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 DIS3L2Q8IYB7 885 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 CRACR2BQ8N4Y2 399 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MAGEB6Q8N7X4 407 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PHC3Q8NDX5 983 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PHKBQ93100 1093 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SMARCE1Q969G3 411 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 AIFM3Q96NN9 605 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 CDC5LQ99459 802 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MPHOSPH8Q99549 860 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 PYM1Q9BRP8 204 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 TUBB2BQ9BVA1 445 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 RNF26Q9BY78 433 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SMG9Q9H0W8 520 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 ARGLU1Q9NWB6 273 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 ADAMTS1Q9UHI8 967 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 ANAPC4Q9UJX5 808 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 FBXO2Q9UK22 296 aaPredicted RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MAN1B1Q9UKM7 699 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 SRPRBQ9Y5M8 271 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 RTL9Q8NET4 1388 aa6.79□□□□□ -1.32
CHMP4A-210ENST00000552620 MROH7-TTC4A0A0A0MT08 1334 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 STRCP1A6NGW2 1772 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 BTBD18B2RXH4 712 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ENC1O14682 589 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 PRPF3O43395 683 aaKnown RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 MBD4O95243 580 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CALM1P0DP23 149 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CALM2P0DP24 149 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CALM3P0DP25 149 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ZNF18P17022 549 aa6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
CHMP4A-210ENST00000552620 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms