RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 MTM1Q13496 603 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SNX1Q13596 522 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 TRIP13Q15645 432 aaPredicted RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 PASD1Q8IV76 773 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 EHD2Q9NZN4 543 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 MYMKA6NI61 221 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 HSF2BPO75031 334 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 PPP1R7Q15435 360 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 ZNF354CQ86Y25 554 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 IFT74Q96LB3 600 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 IFNB1P01574 187 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 STRN3Q13033 797 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SEC23AQ15436 765 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SOX10P56693 466 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 EHBP1Q8NDI1 1231 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 MGARPQ8TDB4 240 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 PDE11AQ9HCR9 933 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 DUSP10Q9Y6W6 482 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 CCDC66A2RUB6 948 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 LRRC53A6NM62 1247 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 INO80B-WBP1J3KQ70 363 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 ORC4O43929 436 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NCBP1Q09161 790 aaKnown RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 SEZ6Q53EL9 994 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 GJB7Q6PEY0 223 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NLRP4Q96MN2 994 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 INO80BQ9C086 356 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 KIAA0754O94854 1291 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NDUFA10O95299 355 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 PLA2G4FQ68DD2 849 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 STX10O60499 249 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 CCNE1P24864 410 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 PMS1P54277 932 aaKnown RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 COASYQ13057 564 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 KRT12Q99456 494 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 MFAP3LO75121 409 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 LIG4P49917 911 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 CCZ1BP86790 482 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 C2CD6Q53TS8 623 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 BSPRYQ5W0U4 402 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 DEPTORQ8TB45 409 aa11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
TGFBR1-209ENST00000552516 NEBLO76041 1014 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 STAT1P42224 750 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 NUMBP49757 651 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TRIML1Q8N9V2 468 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 FAM84AQ96KN4 292 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 UBE2TQ9NPD8 197 aaPredicted RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TTLL3Q9Y4R7 772 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 CKAP4Q07065 602 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 PIK3R2O00459 728 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TRAPPC10P48553 1259 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 NPEPPSP55786 919 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 GUCY2DQ02846 1103 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 DHX36Q9H2U1 1008 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 PCP11498 1178 aaKnown RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TRPC3Q13507 836 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 RAD9BQ6WBX8 426 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 C10orf67Q8IYJ2 551 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 KCNK9Q9NPC2 374 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 SRGNP10124 158 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 ZNF211Q13398 564 aaPredicted RBP11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 TNFAIP1Q13829 316 aa11.82□□□□□ -0.52
TGFBR1-209ENST00000552516 RPS6KA1Q15418 735 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms