RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CATSPERZQ9NTU4 200 aa5.27□□□□□ -1.57
LSM6P2-201ENST00000552208 SLC12A8A0AV02 714 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 CREB3O43889 395 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 H2AFYO75367 372 aaKnown RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ASGR2P07307 311 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 CT47B1P0C2W7 299 aaPredicted RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ENDOUP21128 410 aaKnown RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 RPL11P62913 178 aaKnown RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 HTRA3P83110 453 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 OS9Q13438 667 aaPredicted RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 PDCD1Q15116 288 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 GPR19Q15760 415 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 LONRF3Q496Y0 759 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 CYP27C1Q4G0S4 372 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ANGEL2Q5VTE6 544 aaKnown RBP5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 B3GNT9Q6UX72 402 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ZNF765Q7L2R6 523 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 THAP5Q7Z6K1 395 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 NOSTRINQ8IVI9 506 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ZNF610Q8N9Z0 462 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 PJA1Q8NG27 643 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 RUNDC1Q96C34 613 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 CLIP3Q96DZ5 547 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 TBC1D32Q96NH3 1257 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 KCNJ15Q99712 375 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 ZDHHC5Q9C0B5 715 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 MKNK2Q9HBH9 465 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 SEMA3GQ9NS98 782 aa5.26□□□□□ -1.57
LSM6P2-201ENST00000552208 HMX2A2RU54 273 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 WTIPA6NIX2 430 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 FAM170BA6NMN3 283 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 FAM155AB1AL88 458 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 H7C1D1 291 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 IFRD1O00458 451 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ERC2O15083 957 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 MYO1BO43795 1136 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 PPP1R11O60927 126 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 TBC1D8O95759 1140 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 VCAM1P19320 739 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 SLC9A1P19634 815 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 LSP1P33241 339 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 SCAND1P57086 179 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 IRF9Q00978 393 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 TEKQ02763 1124 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 GRM3Q14832 879 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 C4orf46Q504U0 113 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 CYP2R1Q6VVX0 501 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ZPBP2Q6X784 338 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ARHGAP36Q6ZRI8 547 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 PNMA8AQ86V59 439 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 KIAA1958Q8N8K9 716 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 SH3RF2Q8TEC5 729 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ZNF526Q8TF50 670 aaPredicted RBP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 DLG3Q92796 817 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 EVI5LQ96CN4 794 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 HSPA12BQ96MM6 686 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 MS4A5Q9H3V2 200 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 C7orf69Q9H7B7 122 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ZMAT4Q9H898 229 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 DDX21Q9NR30 783 aaKnown RBP eCLIP5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ERVK13-1Q9NX77 482 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 MKS1Q9NXB0 559 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 CLDND1Q9NY35 253 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 PLAGL2Q9UPG8 496 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 X6R8D5 127 aa5.25□□□□□ -1.57
LSM6P2-201ENST00000552208 ANO9A1A5B4 782 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 KLHL33A6NCF5 533 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 MAN2B1O00754 1011 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 PHKG2P15735 406 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 CYP27A1Q02318 531 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 LAPTM5Q13571 262 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 MOGSQ13724 837 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 MORC3Q14149 939 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 BRD3Q15059 726 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 OTOP3Q7RTS5 596 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 CDADC1Q9BWV3 514 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 DDX20Q9UHI6 824 aaKnown RBP5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 ZNF652Q9Y2D9 606 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 PTPN22Q9Y2R2 807 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 PCDHA11Q9Y5I1 949 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 B3GALT1Q9Y5Z6 326 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 MRFAP1Q9Y605 127 aa5.24□□□□□ -1.57
LSM6P2-201ENST00000552208 GOLGA8AA7E2F4 631 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 GOLGA8BA8MQT2 603 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 H3BS24 57 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 NKRFO15226 690 aaKnown RBP eCLIP5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 NPHS1O60500 1241 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 FKTNO75072 461 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 KRT37O76014 449 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 ESR1P03372 595 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 F13BP05160 661 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 CLCN7P51798 805 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 SEC23AQ15436 765 aa5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 IFI16Q16666 785 aaKnown RBP5.23□□□□□ -1.57
LSM6P2-201ENST00000552208 PLA2G4EQ3MJ16 856 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms