RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 HSDL1Q3SXM5 330 aa21.31■■□□□ 1
CTDSP2-207ENST00000551594 ANKLE1Q8NAG6 615 aa21.31■■□□□ 1
CTDSP2-207ENST00000551594 EMID1Q96A84 441 aaPredicted RBP21.31■■□□□ 1
CTDSP2-207ENST00000551594 FERMT2Q96AC1 680 aa21.31■■□□□ 1
CTDSP2-207ENST00000551594 ZNF577Q9BSK1 485 aa21.31■■□□□ 1
CTDSP2-207ENST00000551594 A6NJR5 290 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 DDX39AO00148 427 aaKnown RBP21.3■■□□□ 1
CTDSP2-207ENST00000551594 IPO5O00410 1097 aaKnown RBP21.3■■□□□ 1
CTDSP2-207ENST00000551594 STX6O43752 255 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 CST5P28325 142 aaPredicted RBP21.3■■□□□ 1
CTDSP2-207ENST00000551594 NBR1Q14596 966 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 PPP4R3AQ6IN85 833 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 MOXD1Q6UVY6 613 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 METTL7BQ6UX53 244 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 MTMR6Q9Y217 621 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 DNAH12Q6ZR08 3092 aa21.3■■□□□ 1
CTDSP2-207ENST00000551594 MKI67P46013 3256 aaKnown RBP21.29■■□□□ 1
CTDSP2-207ENST00000551594 DHX15O43143 795 aaKnown RBP21.29■■□□□ 1
CTDSP2-207ENST00000551594 ASGR1P07306 291 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 MMP3P08254 477 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 MYL3P08590 195 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 CPT1AP50416 773 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
CTDSP2-207ENST00000551594 ACLYP53396 1101 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 POTEDQ86YR6 584 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 GIMAP8Q8ND71 665 aaPredicted RBP21.29■■□□□ 1
CTDSP2-207ENST00000551594 PHF24Q9UPV7 400 aa21.29■■□□□ 1
CTDSP2-207ENST00000551594 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 CAPN2P17655 700 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 ZNF174Q15697 407 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 UBE2Q1Q7Z7E8 422 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 PCSK9Q8NBP7 692 aaKnown RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 PPTC7Q8NI37 304 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 ETNPPLQ8TBG4 499 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 SLC5A5Q92911 643 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 NAP1L4Q99733 375 aaKnown RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 SDF4Q9BRK5 362 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 TSEN34Q9BSV6 310 aaKnown RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 SENP6Q9GZR1 1112 aaPredicted RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 JPH1Q9HDC5 661 aaPredicted RBP21.28■■□□□ 1
CTDSP2-207ENST00000551594 NFASCO94856 1347 aa21.28■■□□□ 1
CTDSP2-207ENST00000551594 COL6A1P12109 1028 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 MCM7P33993 719 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 BRDTQ58F21 947 aaPredicted RBP21.27■■□□□ 1
CTDSP2-207ENST00000551594 TTC38Q5R3I4 469 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 FOXD4L5Q5VV16 416 aaPredicted RBP21.27■■□□□ 1
CTDSP2-207ENST00000551594 FOXD4L4Q8WXT5 416 aaPredicted RBP21.27■■□□□ 1
CTDSP2-207ENST00000551594 GPR20Q99678 358 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 C11orf49Q9H6J7 331 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
CTDSP2-207ENST00000551594 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
CTDSP2-207ENST00000551594 A0A1W2PQ45 241 aaPredicted RBP21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 GSTTP1A0A1W2PQM5 241 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 A0A1W2PQY0 241 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 NOP56O00567 594 aaKnown RBP21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 ZEB2O60315 1214 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 CCNE2O96020 404 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 PURAQ00577 322 aaKnown RBP21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 RESTQ13127 1097 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 PKP1Q13835 747 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 NECAB2Q7Z6G3 386 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 HAS1Q92839 578 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 KCNMB3Q9NPA1 279 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 TSHZ2Q9NRE2 1034 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 TBC1D22BQ9NU19 505 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 PCDHB6Q9Y5E3 794 aa21.26■□□□□ 0.99
CTDSP2-207ENST00000551594 MOXD2PA6NHM9 499 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 ZNF286BP0CG31 522 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 TRAPPC10P48553 1259 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 DGKDQ16760 1214 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 UTP14CQ5TAP6 766 aaKnown RBP21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 LRCH2Q5VUJ6 765 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 PPP1R13LQ8WUF5 828 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 TMEM60Q9H2L4 133 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 POLR3EQ9NVU0 708 aa21.25■□□□□ 0.99
CTDSP2-207ENST00000551594 NEMFO60524 1076 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 GAS7O60861 476 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 PPFIA4O75335 1185 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 PSMD10O75832 226 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 HOXD8P13378 290 aaPredicted RBP21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 ANP32AP39687 249 aaKnown RBP21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 ATN1P54259 1190 aaPredicted RBP21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 ACTR2P61160 394 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 PSMC6P62333 389 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 FAM173BQ6P4H8 233 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 BRAPQ7Z569 592 aa21.24■□□□□ 0.99
CTDSP2-207ENST00000551594 CHMP2AO43633 222 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 MARCH6O60337 910 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 TCF7P36402 384 aaPredicted RBP21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 CHMP4BP1P59074 171 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 CALCRLQ16602 461 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 SEPT1Q8WYJ6 367 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 KAT2BQ92831 832 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 GLT1D1Q96MS3 346 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 RIT2Q99578 217 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 MTG1Q9BT17 334 aaPredicted RBP21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 TEKT3Q9BXF9 490 aa21.23■□□□□ 0.99
CTDSP2-207ENST00000551594 UNC45AQ9H3U1 944 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms