RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SPATS1Q496A3 300 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 BICRALQ6AI39 1079 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 TMC6Q7Z403 805 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 FGD2Q7Z6J4 655 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 GGNQ86UU5 652 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 SLKQ9H2G2 1235 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-215ENST00000551391 EPB41L4AQ9HCS5 686 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-215ENST00000551391 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
SCAF11-215ENST00000551391 COA3Q9Y2R0 106 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-215ENST00000551391 GSTA4O15217 222 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 DGKIO75912 1065 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 DNAJC8O75937 253 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 RASGRP1O95267 797 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 NTRK1P04629 796 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 KCNA6P17658 529 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 SDSP20132 328 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 MAPKAPK2P49137 400 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 SLC9A5Q14940 896 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 CHRNA2Q15822 529 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 TM4SF20Q53R12 229 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 EMC4Q5J8M3 183 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 HABP4Q5JVS0 413 aaKnown RBP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 CYP4F22Q6NT55 531 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 C16orf59Q7L2K0 433 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 FRMD5Q7Z6J6 570 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 DCP2Q8IU60 420 aaKnown RBP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 NIM1KQ8IY84 436 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 TMEFF1Q8IYR6 380 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 LINC01356Q8N9X3 169 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 FBXW5Q969U6 566 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 MFSD3Q96ES6 412 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 PEX11GQ96HA9 241 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 CELF4Q9BZC1 486 aaKnown RBP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 IPPKQ9H8X2 491 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 KLHL14Q9P2G3 628 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 PPARGC1AQ9UBK2 798 aaKnown RBP5.05□□□□□ -1.6
SCAF11-215ENST00000551391 NUDT5Q9UKK9 219 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 PRKAB1Q9Y478 270 aa5.05□□□□□ -1.6
SCAF11-215ENST00000551391 NUDT19A8MXV4 375 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 BUB1BO60566 1050 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-215ENST00000551391 TADA3O75528 432 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 ZBTB7AO95365 584 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 CKMP06732 381 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 POU3F2P20265 443 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-215ENST00000551391 IGFALSP35858 605 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 KCNC1P48547 511 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 SPIRE1Q08AE8 756 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 FAM47CQ5HY64 1035 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 OTOP3Q7RTS5 596 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 IGDCC3Q8IVU1 814 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 ZC3H7AQ8IWR0 971 aaKnown RBP5.04□□□□□ -1.6
SCAF11-215ENST00000551391 SEC14L1Q92503 715 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 TSPAN17Q96FV3 270 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 JAM3Q9BX67 310 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 PDGFDQ9GZP0 370 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-215ENST00000551391 ADAM7Q9H2U9 754 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 SLC6A20Q9NP91 592 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
SCAF11-215ENST00000551391 F8W031 263 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 KRIT1O00522 736 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 HGSO14964 777 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 MAFKO60675 156 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 PFKLP17858 780 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 FLT3P36888 993 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 LACTBP83111 547 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 ZXDCQ2QGD7 858 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 ZCCHC8Q6NZY4 707 aaKnown RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 RPTNQ6XPR3 784 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 LRRTM3Q86VH5 581 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 PHOSPHO1Q8TCT1 267 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 DDX1Q92499 740 aaKnown RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 AP5M1Q9H0R1 490 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 SMOC1Q9H4F8 434 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 ZNF652Q9Y2D9 606 aa5.03□□□□□ -1.6
SCAF11-215ENST00000551391 TNPO3Q9Y5L0 923 aaKnown RBP5.03□□□□□ -1.6
SCAF11-215ENST00000551391 A0A087X0B3 334 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 FAM83GA6ND36 823 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 SGSM2O43147 1006 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 OPA1O60313 960 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 GNAT1P11488 350 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 NCKAP1LP55160 1127 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 ST5P78524 1137 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 NFKB2Q00653 900 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 C21orf62-AS1Q17RA5 79 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 PLEKHN1Q494U1 663 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-215ENST00000551391 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 ZC3H14Q6PJT7 736 aaKnown RBP5.02□□□□□ -1.61
SCAF11-215ENST00000551391 DDX53Q86TM3 631 aaKnown RBP5.02□□□□□ -1.61
SCAF11-215ENST00000551391 DHX37Q8IY37 1157 aaKnown RBP5.02□□□□□ -1.61
SCAF11-215ENST00000551391 FAM177A1Q8N128 213 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-215ENST00000551391 BDH2Q9BUT1 245 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 PALD1Q9ULE6 856 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 NUB1Q9Y5A7 615 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 PCDHA5Q9Y5H7 936 aa5.02□□□□□ -1.61
SCAF11-215ENST00000551391 CCDC66A2RUB6 948 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms