RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 SESTD1Q86VW0 696 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 WASF1Q92558 559 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 KAT2BQ92831 832 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 PCDHA4Q9UN74 947 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 LIMCH1Q9UPQ0 1083 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 DNAH12Q6ZR08 3092 aa17.58■□□□□ 0.41
PRPF40B-211ENST00000551063 B4GALT4O60513 344 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 RAG1P15918 1043 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 XBP1P17861 261 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 FAM47CQ5HY64 1035 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 NECAB1Q8N987 351 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 GPR20Q99678 358 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 KCNH7Q9NS40 1196 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 ORC3Q9UBD5 711 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
PRPF40B-211ENST00000551063 HAS3O00219 553 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 MEIS1O00470 390 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 ADAMTS3O15072 1205 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 SORBS3O60504 671 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 ZNF286BP0CG31 522 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 ZNF76P36508 570 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 PSEN2P49810 448 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 SETQ01105 290 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 SLC17A8Q8NDX2 589 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 AIFM3Q96NN9 605 aa17.57■□□□□ 0.4
PRPF40B-211ENST00000551063 NFASCO94856 1347 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 ATP9AO75110 1047 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 TIMP1P01033 207 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 LGALS2P05162 132 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 ITGB8P26012 769 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 CIITAP33076 1130 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 MFSD10Q14728 455 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 NPY5RQ15761 445 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 BLIDQ8IZY5 108 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 CYP2W1Q8TAV3 490 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 BADQ92934 168 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 ZSCAN31Q96LW9 406 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 BCAS3Q9H6U6 928 aa17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
PRPF40B-211ENST00000551063 IGLV3-22A0A075B6J6 115 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 FAM86B1E9PN63 330 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 M0R2N6 131 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 FAM86B2P0C5J1 330 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 ST3GAL1Q11201 340 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 KIAA0753Q2KHM9 967 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 Q7L0L9 218 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 AGO4Q9HCK5 861 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 JPH1Q9HDC5 661 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 MTMR10Q9NXD2 777 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 PKD2L1Q9P0L9 805 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 ZNF215Q9UL58 517 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-211ENST00000551063 LTBP2Q14767 1821 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 ST18O60284 1047 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 ARP10275 920 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 FAM109BQ6ICB4 259 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 MFSD5Q6N075 450 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 PLA2G4DQ86XP0 818 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 C7orf31Q8N865 590 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 NOC4LQ9BVI4 516 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 PPP1R12CQ9BZL4 782 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 STXBP5LQ9Y2K9 1186 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
PRPF40B-211ENST00000551063 H3BRB1 525 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 USP11P51784 963 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 CHMP4BP1P59074 171 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 SP4Q02446 784 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 FPGSQ05932 587 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 TUT1Q9H6E5 874 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 HDAC6Q9UBN7 1215 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 KCNJ14Q9UNX9 436 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 NOD1Q9Y239 953 aa17.53■□□□□ 0.4
PRPF40B-211ENST00000551063 JAK2O60674 1132 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 TCF7P36402 384 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 PTGISQ16647 500 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 MOXD1Q6UVY6 613 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 TMEM199Q8N511 208 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 TBCKQ8TEA7 893 aa17.52■□□□□ 0.4
PRPF40B-211ENST00000551063 EMSYQ7Z589 1322 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 GSTTP1A0A1W2PQM5 241 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms