RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 VAV3Q9UKW4 847 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 ARID2Q68CP9 1835 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 CTAGE5O15320 804 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 SEPT4O43236 478 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 CCNE2O96020 404 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 OR52Z1P0C646 297 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 TXNP10599 105 aaKnown RBP15.28■□□□□ 0.04
ERBB3-215ENST00000550828 GRIN1Q05586 938 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 SPIRE1Q08AE8 756 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 B3GNT9Q6UX72 402 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 LINC00301Q8NCQ3 95 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 ZNF333Q96JL9 665 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 ZNF577Q9BSK1 485 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 POLR3EQ9NVU0 708 aa15.28■□□□□ 0.04
ERBB3-215ENST00000550828 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 NFASCO94856 1347 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 MYADML2A6NDP7 307 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.04
ERBB3-215ENST00000550828 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
ERBB3-215ENST00000550828 GGPS1O95749 300 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 MYCP01106 439 aaPredicted RBP15.27■□□□□ 0.04
ERBB3-215ENST00000550828 TGFB3P10600 412 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 TNFAIP2Q03169 654 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 CELF3Q5SZQ8 465 aaKnown RBP15.27■□□□□ 0.04
ERBB3-215ENST00000550828 CDHR1Q96JP9 859 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
ERBB3-215ENST00000550828 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
ERBB3-215ENST00000550828 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 EML1O00423 815 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 TBX3O15119 743 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 MAFGO15525 162 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 YEATS4O95619 227 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 CCL5P13501 91 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 AKR1A1P14550 325 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 CNGA1P29973 690 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 SLC39A14Q15043 492 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 LHX8Q68G74 356 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 FAM20AQ96MK3 541 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 RIT2Q99578 217 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 SENP7Q9BQF6 1050 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 TMEM106CQ9BVX2 250 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 UNC45AQ9H3U1 944 aa15.26■□□□□ 0.03
ERBB3-215ENST00000550828 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 PAK6Q9NQU5 681 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 FBXO2Q9UK22 296 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 MORC2Q9Y6X9 1032 aaPredicted RBP15.26■□□□□ 0.03
ERBB3-215ENST00000550828 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 DUSP11O75319 330 aaKnown RBP15.25■□□□□ 0.03
ERBB3-215ENST00000550828 GH1P01241 217 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 TXKP42681 527 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 SP4Q02446 784 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 ATL3Q6DD88 541 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 KCNV1Q6PIU1 500 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 METTL7BQ6UX53 244 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
ERBB3-215ENST00000550828 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
ERBB3-215ENST00000550828 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 KAT6AQ92794 2004 aa15.25■□□□□ 0.03
ERBB3-215ENST00000550828 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 POTEMA6NI47 508 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 PP2D1A8MPX8 630 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 DYNC1LI2O43237 492 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 GAS7O60861 476 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 BAG4O95429 457 aaKnown RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 PGK1P00558 417 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 PRPHP41219 470 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 KRT85P78386 507 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 HSDL1Q3SXM5 330 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 AFG1LQ8WV93 481 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 CLIC6Q96NY7 704 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
ERBB3-215ENST00000550828 TTC12Q9H892 705 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-215ENST00000550828 LOXHD1Q8IVV2 1947 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 LAD1O00515 517 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 SPTLC2O15270 562 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 BMP15O95972 392 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 HOXD8P13378 290 aaPredicted RBP15.23■□□□□ 0.03
ERBB3-215ENST00000550828 NCLP19338 710 aaKnown RBP15.23■□□□□ 0.03
ERBB3-215ENST00000550828 EN2P19622 333 aaPredicted RBP15.23■□□□□ 0.03
ERBB3-215ENST00000550828 TECP42680 631 aa15.23■□□□□ 0.03
ERBB3-215ENST00000550828 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.03
ERBB3-215ENST00000550828 GJA9P57773 515 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms