RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ASB11Q8WXH4 323 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 KAZALD1Q96I82 304 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 SUCLG2Q96I99 432 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 POLR3KQ9Y2Y1 108 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-213ENST00000550629 LRRFIP2Q9Y608 721 aaKnown RBP7.11□□□□□ -1.27
SCAF11-213ENST00000550629 CAPN6Q9Y6Q1 641 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 LRP5O75197 1615 aa7.11□□□□□ -1.27
SCAF11-213ENST00000550629 PITPNM2Q9BZ72 1349 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-213ENST00000550629 HMMRO75330 724 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 CBX7O95931 251 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 SRGNP10124 158 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 NPR1P16066 1061 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 MPP2Q14168 576 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 TMEM201Q5SNT2 666 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 STYK1Q6J9G0 422 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 LMBR1LQ6UX01 489 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 SYNE4Q8N205 404 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 ANKRD44Q8N8A2 993 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 EXOC6Q8TAG9 804 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 CRAMP1Q96RY5 1269 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 SLC38A3Q99624 504 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 BICC1Q9H694 974 aaKnown RBP7.1□□□□□ -1.27
SCAF11-213ENST00000550629 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 KIF13BQ9NQT8 1826 aa7.1□□□□□ -1.27
SCAF11-213ENST00000550629 DDX60Q8IY21 1712 aaKnown RBP7.1□□□□□ -1.27
SCAF11-213ENST00000550629 H0YIN7 160 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 TLR3O15455 904 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 CYP7A1P22680 504 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 ALDH1B1P30837 517 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 EIF4A3P38919 411 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 ATP8B2P98198 1209 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 IFIT5Q13325 482 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 IKZF1Q13422 519 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 HDAC1Q13547 482 aaPredicted RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 CCDC57Q2TAC2 916 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 EPHA10Q5JZY3 1008 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 CEP85Q6P2H3 762 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 DDX46Q7L014 1031 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 HS2ST1Q7LGA3 356 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 DNAJB8Q8NHS0 232 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 SSH3Q8TE77 659 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 TMEM40Q8WWA1 233 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 RPGRQ92834 1020 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 MASTLQ96GX5 879 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 RBM17Q96I25 401 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 CDC5LQ99459 802 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 KCNQ5Q9NR82 932 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 REV1Q9UBZ9 1251 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
SCAF11-213ENST00000550629 TNRC6CQ9HCJ0 1690 aaKnown RBP7.09□□□□□ -1.27
SCAF11-213ENST00000550629 ANKRD18BA2A2Z9 1011 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 SRGAP3O43295 1099 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 GREM1O60565 184 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 BBOX1O75936 387 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 CIAO1O76071 339 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 HTR3BO95264 441 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 C2CD5Q86YS7 1000 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 PPP1R13LQ8WUF5 828 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 CYB5D2Q8WUJ1 264 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 GREM2Q9H772 168 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 PRDM7Q9NQW5 492 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 PPP1R1BQ9UD71 204 aaPredicted RBP7.08□□□□□ -1.28
SCAF11-213ENST00000550629 CEP131Q9UPN4 1083 aa7.08□□□□□ -1.28
SCAF11-213ENST00000550629 ANKRD31Q8N7Z5 1873 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 H3BS24 57 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ETV3P41162 512 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 KIR3DL1P43629 444 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 RFX5P48382 616 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 RPS8P62241 208 aaKnown RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 IRX6P78412 446 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ZP2Q05996 745 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 TNK2Q07912 1038 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 GRAPQ13588 217 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 HSP90AB4PQ58FF6 505 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ANKRD18AQ8IVF6 992 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 GRAPLQ8TC17 118 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 RWDD1Q9H446 243 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
SCAF11-213ENST00000550629 NOP58Q9Y2X3 529 aaKnown RBP7.07□□□□□ -1.28
SCAF11-213ENST00000550629 DLEC1Q9Y238 1755 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms