RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 ALCAMQ13740 583 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 MSH2P43246 934 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 Q3C1V9 767 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 SUPT20HL1Q3ZLR7 823 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 KSR1Q8IVT5 923 aa13.53□□□□□ -0.24
RAB3IP-212ENST00000550536 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 PMLP29590 882 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 NAA35Q5VZE5 725 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 P2RX5Q93086 422 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 CLTCL1P53675 1640 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 ECEL1O95672 775 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 SPDYE6P0CI01 402 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 PARD3BQ8TEW8 1205 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 PBKQ96KB5 322 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 TTC25Q96NG3 672 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 F8W8V4 182 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 MMP1P03956 469 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 DDIT3P35638 169 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 PALD1Q9ULE6 856 aa13.52□□□□□ -0.24
RAB3IP-212ENST00000550536 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 TAB3Q8N5C8 712 aaPredicted RBP13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 ATP6V1E2Q96A05 226 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 DAAM1Q9Y4D1 1078 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 APOA5Q6Q788 366 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 IL6STP40189 918 aaPredicted RBP13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 ARL4AP40617 200 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 KCTD16Q68DU8 428 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 DARS2Q6PI48 645 aaKnown RBP13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 CCNYQ8ND76 341 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 COPRSQ9NQ92 184 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 TXLNGQ9NUQ3 528 aa13.52□□□□□ -0.25
RAB3IP-212ENST00000550536 SPECC1L-ADORA2AF8WAN1 911 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 ARL13BQ3SXY8 428 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 NVLO15381 856 aaKnown RBP13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 RNF17Q9BXT8 1623 aaKnown RBP13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 GSTA4O15217 222 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 GPC4O75487 556 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 MX2P20592 715 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 RBL2Q08999 1139 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 PSMD2Q13200 908 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 GCNAQ96QF7 691 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 GNGT2O14610 69 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 KRT1P04264 644 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 PSAPP07602 524 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 UBE2TQ9NPD8 197 aaPredicted RBP13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 PRPSAP2O60256 369 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 SLC4A1P02730 911 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 SIX6OS1Q8N1H7 587 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
RAB3IP-212ENST00000550536 TMED2Q15363 201 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 HSP90AA5PQ58FG0 334 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SRRM1Q8IYB3 904 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SMYD4Q8IYR2 804 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 IKBKBO14920 756 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CIITAP33076 1130 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SURF1Q15526 300 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 TPX2Q9ULW0 747 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SLC8A2Q9UPR5 921 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SERPING1P05155 500 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 FMO2Q99518 471 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CALN1Q9BXU9 219 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 OLA1Q9NTK5 396 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 CDR2Q01850 454 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 SNX1Q13596 522 aa13.5□□□□□ -0.25
RAB3IP-212ENST00000550536 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms