RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 BMP2KQ9NSY1 1161 aaPredicted RBP23.32■■□□□ 1.32
PRDM4-205ENST00000550376 PPP2R2CQ9Y2T4 447 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 BICDL2A1A5D9 508 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 TBX3O15119 743 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 WDR46O15213 610 aaKnown RBP23.32■■□□□ 1.32
PRDM4-205ENST00000550376 STX10O60499 249 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 RPA1P27694 616 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 CEP55Q53EZ4 464 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 MCTP2Q6DN12 878 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 RAD9BQ6WBX8 426 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 OTOP1Q7RTM1 612 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 GPRC5DQ9NZD1 345 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 DNM3Q9UQ16 869 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 SFI1A8K8P3 1242 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 RSPH10B2B2RC85 870 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 DDNO94850 711 aaPredicted RBP23.31■■□□□ 1.32
PRDM4-205ENST00000550376 RSPH10BP0C881 870 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 HMGCS2P54868 508 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 FAM26FQ5R3K3 315 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 HAUS3Q68CZ6 603 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 LGALS16A8MUM7 142 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 EEF1GP26641 437 aaKnown RBP23.31■■□□□ 1.32
PRDM4-205ENST00000550376 NAA30Q147X3 362 aaPredicted RBP23.31■■□□□ 1.32
PRDM4-205ENST00000550376 GPIHBP1Q8IV16 184 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 ZNF507Q8TCN5 953 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 ATG4CQ96DT6 458 aa23.31■■□□□ 1.32
PRDM4-205ENST00000550376 ITGB5P18084 799 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 CASP5P51878 434 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 TRMT1LQ7Z2T5 733 aaKnown RBP23.3■■□□□ 1.32
PRDM4-205ENST00000550376 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 DYDC2Q96IM9 177 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 WDR11Q9BZH6 1224 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 KCND1Q9NSA2 647 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 RIPK3Q9Y572 518 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 PTPRAP18433 802 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 GUF1Q8N442 669 aaKnown RBP23.3■■□□□ 1.32
PRDM4-205ENST00000550376 LPAR1Q92633 364 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 ZNF577Q9BSK1 485 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 NOC4LQ9BVI4 516 aaKnown RBP23.3■■□□□ 1.32
PRDM4-205ENST00000550376 SLC38A10Q9HBR0 1119 aa23.3■■□□□ 1.32
PRDM4-205ENST00000550376 TTC26A0AVF1 554 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 PSMD10O75832 226 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 MIIPQ5JXC2 388 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 RUSC1Q9BVN2 902 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 FHDC1Q9C0D6 1143 aaPredicted RBP23.29■■□□□ 1.32
PRDM4-205ENST00000550376 LRRC27Q9C0I9 530 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 WRAP73Q9P2S5 460 aaPredicted RBP23.29■■□□□ 1.32
PRDM4-205ENST00000550376 ATAD5Q96QE3 1844 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 FANCGO15287 622 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 GAS7O60861 476 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 SLITRK3O94933 977 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 KRT9P35527 623 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 TBC1D8BQ0IIM8 1120 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 TRAF1Q13077 416 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 MYOCDQ8IZQ8 938 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 PANX2Q96RD6 677 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 REEP2Q9BRK0 252 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 PCDHA2Q9Y5H9 948 aa23.29■■□□□ 1.32
PRDM4-205ENST00000550376 EIF2AK2P19525 551 aaKnown RBP23.28■■□□□ 1.32
PRDM4-205ENST00000550376 BACE1P56817 501 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 GIT2Q14161 759 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 SCYL3Q8IZE3 742 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 CCDC155Q8N6L0 562 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 TAAR1Q96RJ0 339 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 IRX2Q9BZI1 471 aaPredicted RBP23.28■■□□□ 1.32
PRDM4-205ENST00000550376 PICK1Q9NRD5 415 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 PEX10O60683 326 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 SEMA3FQ13275 785 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 SYCP1Q15431 976 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 PCMTD1Q96MG8 357 aaPredicted RBP23.28■■□□□ 1.32
PRDM4-205ENST00000550376 ABHD10Q9NUJ1 306 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 DNAI1Q9UI46 699 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 PPP1R9AQ9ULJ8 1098 aa23.28■■□□□ 1.32
PRDM4-205ENST00000550376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.28■■□□□ 1.32
PRDM4-205ENST00000550376 RASSF10A6NK89 507 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 KCNJ6P48051 423 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 HSD17B4P51659 736 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 ERVK-24P63145 666 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 NSMFQ6X4W1 530 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 CCDC65Q8IXS2 484 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 CHP1Q99653 195 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 HSD17B14Q9BPX1 270 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 UNC45AQ9H3U1 944 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 MRPL44Q9H9J2 332 aaKnown RBP23.27■■□□□ 1.32
PRDM4-205ENST00000550376 AGPAT5Q9NUQ2 364 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 CTDP1Q9Y5B0 961 aaPredicted RBP23.27■■□□□ 1.32
PRDM4-205ENST00000550376 RPS6P62753 249 aaKnown RBP23.27■■□□□ 1.32
PRDM4-205ENST00000550376 DCAF15Q66K64 600 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 SCFD1Q8WVM8 642 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 SLC5A5Q92911 643 aa23.27■■□□□ 1.32
PRDM4-205ENST00000550376 ITIH6Q6UXX5 1313 aa23.27■■□□□ 1.31
PRDM4-205ENST00000550376 IPO5O00410 1097 aaKnown RBP23.26■■□□□ 1.31
PRDM4-205ENST00000550376 TRAF5O00463 557 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 TRIM65Q6PJ69 517 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 SYT2Q8N9I0 419 aaPredicted RBP23.26■■□□□ 1.31
PRDM4-205ENST00000550376 IKZF4Q9H2S9 585 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 LMNB1P20700 586 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 SFR1Q86XK3 245 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 CNGA4Q8IV77 575 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms