RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 JAG1P78504 1218 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 CXCL9Q07325 125 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 ADAT2Q7Z6V5 191 aaKnown RBP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 RIC8AQ9NPQ8 531 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 ZBTB5O15062 677 aa12.27□□□□□ -0.44
LINC00661-204ENST00000549354 ZEB2O60315 1214 aa12.27□□□□□ -0.44
LINC00661-204ENST00000549354 SEPT2Q15019 361 aa12.27□□□□□ -0.44
LINC00661-204ENST00000549354 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.44
LINC00661-204ENST00000549354 WDR59Q6PJI9 974 aa12.27□□□□□ -0.44
LINC00661-204ENST00000549354 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 ZNHIT6Q9NWK9 470 aaKnown RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.44
LINC00661-204ENST00000549354 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 EPHB6O15197 1021 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 STIM1Q13586 685 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 CACNA2D4Q7Z3S7 1137 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 AFAP1L1Q8TED9 768 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 CCDC42Q96M95 316 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 CSRNP1Q96S65 589 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 RWDD2AQ9UIY3 292 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 NFKBIEO00221 500 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 ATP2C2O75185 946 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 AMPD2Q01433 879 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 PLS1Q14651 629 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 LIMA1Q9UHB6 759 aaKnown RBP12.27□□□□□ -0.45
LINC00661-204ENST00000549354 SAMM50Q9Y512 469 aa12.27□□□□□ -0.45
LINC00661-204ENST00000549354 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 PSMA7O14818 248 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 EDIL3O43854 480 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 SYF2O95926 243 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CCT5P48643 541 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 ICA1Q05084 483 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CCDC181Q5TID7 509 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 NFRKBQ6P4R8 1299 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CABP7Q86V35 215 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 REXO1Q8N1G1 1221 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 GBP3Q9H0R5 595 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 NHEJ1Q9H9Q4 299 aaPredicted RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CLSTN1O94985 981 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 ADCY7P51828 1080 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 USP14P54578 494 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 RASSF7Q02833 373 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 TCERG1LQ5VWI1 586 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 COG1Q8WTW3 980 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CNOT6LQ96LI5 555 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 DMGDHQ9UI17 866 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 MEIS1O00470 390 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 TDP2O95551 362 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 LIG3P49916 1009 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 KCTD1Q719H9 257 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 NUDT12Q9BQG2 462 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 SELENOOQ9BVL4 669 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 GLT8D2Q9H1C3 349 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 BCCIPQ9P287 314 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00661-204ENST00000549354 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
LINC00661-204ENST00000549354 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 F5H6K3 240 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 KRT86O43790 486 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 FTCDO95954 541 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 KLRC3Q07444 240 aa12.25□□□□□ -0.45
LINC00661-204ENST00000549354 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms