RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ZEB2O60315 1214 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 SNAI1O95863 264 aaPredicted RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 GH1P01241 217 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 TXNP10599 105 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 RARBP10826 455 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 CYBAP13498 195 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 MUTP22033 750 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 CYP2C19P33261 490 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 LONP1P36776 959 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 TOB1P50616 345 aaPredicted RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 JAK3P52333 1124 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 TNFAIP2Q03169 654 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 DUSP28Q4G0W2 176 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 HAUS3Q68CZ6 603 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 METTL7BQ6UX53 244 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 ETNPPLQ8TBG4 499 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 SLC5A5Q92911 643 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 TNPO1Q92973 898 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 PURBQ96QR8 312 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 MLXIPQ9HAP2 919 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 WDR64B1ANS9 1081 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 NOP56O00567 594 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 MSH4O15457 936 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 SLC37A4O43826 429 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 KPNA6O60684 536 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CUTAO60888 179 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CPT1AP50416 773 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CCL14Q16627 93 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 MAP3K21Q5TCX8 1036 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 TAPT1Q6NXT6 567 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 LENG9Q96B70 501 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 MTMR9Q96QG7 549 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 TTC12Q9H892 705 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 FLRT1Q9NZU1 646 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 DDX41Q9UJV9 622 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 RCOR1Q9UKL0 485 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 KDM3AQ9Y4C1 1321 aa11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 MYH9P35579 1960 aaKnown RBP11.01□□□□□ -0.65
SMARCD1-206ENST00000549274 PSMD10O75832 226 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 RGS20O76081 388 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 GGPS1O95749 300 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 INHAP05111 366 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
SMARCD1-206ENST00000549274 ELNP15502 786 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 KCNA2P16389 499 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 CNGA1P29973 690 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 ME1P48163 572 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 SLC26A2P50443 739 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 CACNB2Q08289 660 aaPredicted RBP11□□□□□ -0.65
SMARCD1-206ENST00000549274 CELF3Q5SZQ8 465 aaKnown RBP11□□□□□ -0.65
SMARCD1-206ENST00000549274 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 OR6J1Q8NGC5 347 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 PPTC7Q8NI37 304 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 CLIC4Q9Y696 253 aa11□□□□□ -0.65
SMARCD1-206ENST00000549274 PSAPP07602 524 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 ARP10275 920 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 UBA1P22314 1058 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 ADCYAP1R1P41586 468 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 TXKP42681 527 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 PTPAQ15257 358 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 FAM160B1Q5W0V3 765 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 KRT79Q5XKE5 535 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 HS6ST3Q8IZP7 471 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 SEPT1Q8WYJ6 367 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 ATP6V0A1Q93050 837 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 ARMC5Q96C12 935 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 FAM13BQ9NYF5 915 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 LRWD1Q9UFC0 647 aa10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 DDX20Q9UHI6 824 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-206ENST00000549274 SAMM50Q9Y512 469 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms