RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 SAFB2Q14151 953 aaKnown RBP eCLIP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 HSP90AA2PQ14568 343 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 SF1Q15637 639 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 C21orf62-AS1Q17RA5 79 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 LONRF2Q1L5Z9 754 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 NOL9Q5SY16 702 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 CRTC3Q6UUV7 619 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 C22orf34Q6ZV56 151 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 TMEM151BQ8IW70 566 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 MFSD4AQ8N468 514 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 SYTL5Q8TDW5 730 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 OSBP2Q969R2 916 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 RCC1LQ96I51 464 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 CCDC136Q96JN2 1154 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 COX4I2Q96KJ9 171 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 ZDHHC15Q96MV8 337 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 FEZ1Q99689 392 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 MCMBPQ9BTE3 642 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 IER2Q9BTL4 223 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 HDAC8Q9BY41 377 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 EPB41L4AQ9HCS5 686 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 ATP13A1Q9HD20 1204 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 GTF2IRD1Q9UHL9 959 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 GPR55Q9Y2T6 319 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 MRPS23Q9Y3D9 190 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 ABCC3O15438 1527 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 NEXMIFQ5QGS0 1516 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 LMTK2Q8IWU2 1503 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 ARAP3Q8WWN8 1544 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 DIP2CQ9Y2E4 1556 aa3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 KDM5AP29375 1690 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 ARHGEF28Q8N1W1 1705 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-206ENST00000549100 A0A087WZG4 1122 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 TRBV23-1A0A0A0MS06 115 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 ZC3H12DA2A288 527 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 IGF2BP3O00425 579 aaKnown RBP eCLIP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 NOP56O00567 594 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 PRODHO43272 600 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DLX3O60479 287 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 VAMP4O75379 141 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 FGFR1P11362 822 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 PABPC1P11940 636 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 PTPRMP28827 1452 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 TRHRP34981 398 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 ACVRL1P37023 503 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 MAGEA10P43363 369 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 RGS19P49795 217 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 MYOM2P54296 1465 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 GYS2P54840 703 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 GFRA1P56159 465 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 TCEA2Q15560 299 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 PRSS53Q2L4Q9 553 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DPY19L1Q2PZI1 675 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DALRD3Q5D0E6 543 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 IQSEC2Q5JU85 1478 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 GTF2IRD2BQ6EKJ0 949 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 RICTORQ6R327 1708 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 CD109Q6YHK3 1445 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 ZNF605Q86T29 641 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 GTF2IRD2Q86UP8 949 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 C1orf159Q96HA4 380 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 CLUHP3Q96NS8 147 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 CDC6Q99741 560 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DHRS4Q9BTZ2 278 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DSCC1Q9BVC3 393 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 DUSP15Q9H1R2 295 aaPredicted RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 NCOA5Q9HCD5 579 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 CWC22Q9HCG8 908 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 CHST7Q9NS84 486 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 PRR13Q9NZ81 148 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 STK26Q9P289 416 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 KCNH3Q9ULD8 1083 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 LAS1LQ9Y4W2 734 aaKnown RBP3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 ST14Q9Y5Y6 855 aa3.06□□□□□ -1.92
DEPDC4-206ENST00000549100 GLI2P10070 1586 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 HECW2Q9P2P5 1572 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 COL3A1P02461 1466 aaPredicted RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 PIK3C2GO75747 1445 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 POGZQ7Z3K3 1410 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 BLACEA4D250 179 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 GNAT3A8MTJ3 354 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 H3BS24 57 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 STXBP3O00186 592 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 IRS4O14654 1257 aaPredicted RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 CLSTN1O94985 981 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 C6orf222P0C671 652 aaPredicted RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 C6P13671 934 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 IFNGR1P15260 489 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 DEKP35659 375 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 MTHFSP49914 203 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 AFF3P51826 1226 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 PABPC4Q13310 644 aaKnown RBP eCLIP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 GRB10Q13322 594 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 NTRK3Q16288 839 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 ZC3H12BQ5HYM0 836 aaKnown RBP3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 CDKAL1Q5VV42 579 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 DENND5AQ6IQ26 1287 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 POMZP3Q6PJE2 187 aa3.05□□□□□ -1.92
DEPDC4-206ENST00000549100 NSMFQ6X4W1 530 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms