RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 SORCS3Q9UPU3 1222 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
PTCH1-217ENST00000548420 NPR3P17342 541 aa16.46■□□□□ 0.23
PTCH1-217ENST00000548420 CRIPAKQ8N1N5 446 aa16.46■□□□□ 0.23
PTCH1-217ENST00000548420 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
PTCH1-217ENST00000548420 S1PR5Q9H228 398 aa16.46■□□□□ 0.23
PTCH1-217ENST00000548420 FANCMQ8IYD8 2048 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 ADRB1P08588 477 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 ALX1Q15699 326 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 ATP8B4Q8TF62 1192 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 AFG1LQ8WV93 481 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-217ENST00000548420 CDH22Q9UJ99 828 aa16.45■□□□□ 0.22
PTCH1-217ENST00000548420 A0A0D9SFI3 127 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 TRIM6-TRIM34B2RNG4 842 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTCH1-217ENST00000548420 APPP05067 770 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 ITGB1P05556 798 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 MMP3P08254 477 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 SDSP20132 328 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 TKFCQ3LXA3 575 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 KIAA0319Q5VV43 1072 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 FLCNQ8NFG4 579 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 RUBCNQ92622 972 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 HINFPQ9BQA5 517 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 EMSYQ7Z589 1322 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 RAD50Q92878 1312 aa16.44■□□□□ 0.22
PTCH1-217ENST00000548420 KIAA1671Q9BY89 1806 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 DCDC2BA2VCK2 349 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 RSPH10B2B2RC85 870 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 PER2O15055 1255 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 RSPH10BP0C881 870 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 AOC1P19801 751 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 RASA1P20936 1047 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 TDO2P48775 406 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-217ENST00000548420 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-217ENST00000548420 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
PTCH1-217ENST00000548420 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 ASGR2P07307 311 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
PTCH1-217ENST00000548420 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-217ENST00000548420 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 NAPBQ9H115 298 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 ASPMQ8IZT6 3477 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 ADGRA3Q8IWK6 1321 aa16.42■□□□□ 0.22
PTCH1-217ENST00000548420 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
PTCH1-217ENST00000548420 THPOP40225 353 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 PSEN2P49810 448 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 PDE4BQ07343 736 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-217ENST00000548420 C7orf31Q8N865 590 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 SEPT8Q92599 483 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 MKL1Q969V6 931 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 PLXNA4Q9HCM2 1894 aa16.41■□□□□ 0.22
PTCH1-217ENST00000548420 FRYQ5TBA9 3013 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 HAS3O00219 553 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 FGAP02671 866 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 FGRP09769 529 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 FDX1P10109 184 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
PTCH1-217ENST00000548420 BMP3P12645 472 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 PPARAQ07869 468 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 P2RX5Q93086 422 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 PPP2R3CQ969Q6 453 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 CHMP4CQ96CF2 233 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 ZNF689Q96CS4 500 aaPredicted RBP16.4■□□□□ 0.22
PTCH1-217ENST00000548420 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 ZNF287Q9HBT7 754 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 ZZEF1O43149 2961 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
PTCH1-217ENST00000548420 SPEGQ15772 3267 aa16.39■□□□□ 0.21
PTCH1-217ENST00000548420 HIP1O00291 1037 aa16.39■□□□□ 0.21
PTCH1-217ENST00000548420 EDNRBP24530 442 aa16.39■□□□□ 0.21
PTCH1-217ENST00000548420 ARHGAP1Q07960 439 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms