RNA–Protein interactions for RNA: ENST00000547169.5

CTDSP2-202, Transcript of CTD small phosphatase 2, humanhuman

TSL 2

Gene CTDSP2, Length 1,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-202ENST00000547169 U2AF2P26368 475 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 SETQ01105 290 aaPredicted RBP17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 PRR16Q569H4 304 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 PRPF38BQ5VTL8 546 aaKnown RBP17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 PPP4R3AQ6IN85 833 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 LENG9Q96B70 501 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 SPATA33Q96N06 139 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 MKI67P46013 3256 aaKnown RBP17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 DOCK5Q9H7D0 1870 aa17.74■□□□□ 0.43
CTDSP2-202ENST00000547169 H3BQV1 296 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 MMP3P08254 477 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 LETM2Q2VYF4 491 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 SLC39A5Q6ZMH5 540 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 ELP1O95163 1332 aa17.73■□□□□ 0.43
CTDSP2-202ENST00000547169 A0A1W2PQ45 241 aaPredicted RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 A0A1W2PQY0 241 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 MSH4O15457 936 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 DHX15O43143 795 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 SORBS3O60504 671 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 TDP2O95551 362 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 MYL3P08590 195 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 GCFC2P16383 781 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 PDCP20941 246 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 PURAQ00577 322 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 ITGB3BPQ13352 177 aaPredicted RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 DGKDQ16760 1214 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 CXCL17Q6UXB2 119 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 GPR20Q99678 358 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 ZNF577Q9BSK1 485 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 TBC1D22BQ9NU19 505 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 PKD2L1Q9P0L9 805 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 IPO5O00410 1097 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 NOSTRINQ8IVI9 506 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 SEPT1Q8WYJ6 367 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 VTI1AQ96AJ9 217 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 STARD7Q9NQZ5 370 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 SLC9A2Q9UBY0 812 aa17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 DDX25Q9UHL0 483 aaKnown RBP17.72■□□□□ 0.43
CTDSP2-202ENST00000547169 GSTTP1A0A1W2PQM5 241 aa17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 CCNT1O60563 726 aaKnown RBP17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 SLC5A5Q92911 643 aa17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 SEZ6LQ9BYH1 1024 aa17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 TELO2Q9Y4R8 837 aa17.71■□□□□ 0.42
CTDSP2-202ENST00000547169 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 ATG7O95352 703 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 SYT1P21579 422 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 CDK7P50613 346 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 ATN1P54259 1190 aaPredicted RBP17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 SNX17Q15036 470 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 MCTP1Q6DN14 999 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 SLC43A3Q8NBI5 491 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 KAT2BQ92831 832 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 UIMC1Q96RL1 719 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 RIT2Q99578 217 aa17.7■□□□□ 0.42
CTDSP2-202ENST00000547169 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 ARVCFO00192 962 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 TBX3O15119 743 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 SLC37A4O43826 429 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 ITGA7Q13683 1181 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 LRRC26Q2I0M4 334 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 ETNPPLQ8TBG4 499 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 KCNMB3Q9NPA1 279 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
CTDSP2-202ENST00000547169 HAS3O00219 553 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 WNT7AO00755 349 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 PSMD10O75832 226 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 ACTR2P61160 394 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 PSMC6P62333 389 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 SP4Q02446 784 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 BECN1Q14457 450 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 HAS1Q92839 578 aa17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 NOL7Q9UMY1 257 aaKnown RBP17.68■□□□□ 0.42
CTDSP2-202ENST00000547169 DDX39AO00148 427 aaKnown RBP17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 LGR5O75473 907 aa17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 CCNE2O96020 404 aa17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 LGALS2P05162 132 aa17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 TCF7P36402 384 aaPredicted RBP17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 TOB1P50616 345 aaPredicted RBP17.67■□□□□ 0.42
CTDSP2-202ENST00000547169 KRT76Q01546 638 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms