RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CCDC65Q8IXS2 484 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 HOOK2Q96ED9 719 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 GDAP1L1Q96MZ0 367 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 TAOK3Q9H2K8 898 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 ST7Q9NRC1 585 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 GCOM1H8Y6P7 765 aaPredicted RBP14.1□□□□□ -0.15
SCAF11-209ENST00000547018 NFIBO00712 420 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 GAS7O60861 476 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 NDUFA10O95299 355 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 POLR2MP0CAP2 368 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 PBX1P40424 430 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 TMTC1Q8IUR5 882 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 DYDC2Q96IM9 177 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 CCDC42Q96M95 316 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 TCEAL9Q9UHQ7 104 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 OPLAHO14841 1288 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 ARP10275 920 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 EEF1GP26641 437 aaKnown RBP14.1□□□□□ -0.15
SCAF11-209ENST00000547018 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
SCAF11-209ENST00000547018 ADAM9Q13443 819 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 ZC2HC1CQ53FD0 456 aaPredicted RBP14.1□□□□□ -0.15
SCAF11-209ENST00000547018 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 THAP9Q9H5L6 903 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 MYOZ2Q9NPC6 264 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 STK17AQ9UEE5 414 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 hCG_1984214I3L0E3 225 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 TBCAO75347 108 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 MYBP10242 640 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 KCNA3P22001 575 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 PDIA5Q14554 519 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 ZNF713Q8N859 430 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 CCDC43Q96MW1 224 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 CUEDC2Q9H467 287 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 MYH7BA7E2Y1 1941 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 CYP11B2P19099 503 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 POLD1P28340 1107 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 NOVP48745 357 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 HDLBPQ00341 1268 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 NBPF12Q5TAG4 269 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 FAM114A1Q8IWE2 563 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 MKL1Q969V6 931 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 JADE2Q9NQC1 790 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 NR2F2P24468 414 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 NMT1P30419 496 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 CXCR5P32302 372 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 ZNF397Q8NF99 534 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 EIF2AK1Q9BQI3 630 aaKnown RBP14.09□□□□□ -0.15
SCAF11-209ENST00000547018 LACRTQ9GZZ8 138 aa14.09□□□□□ -0.15
SCAF11-209ENST00000547018 MAST2Q6P0Q8 1798 aa14.08□□□□□ -0.15
SCAF11-209ENST00000547018 ZMYND10O75800 440 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 ACTN1P12814 892 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 MTMR2Q13614 643 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 UTP14CQ5TAP6 766 aaKnown RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 DNAJC19Q96DA6 116 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 NHEJ1Q9H9Q4 299 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 CTAGE9A4FU28 777 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 BUB1O43683 1085 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 VIL1P09327 827 aaKnown RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 HMGB2P26583 209 aaKnown RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 GMPSP49915 693 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 VWA3BQ502W6 1294 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 CAGE1Q8TC20 777 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 CHURC1Q8WUH1 139 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 MAP7D2Q96T17 732 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 WDR18Q9BV38 432 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 NT5C3AQ9H0P0 336 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 RABGAP1Q9Y3P9 1069 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCAF11-209ENST00000547018 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.16
SCAF11-209ENST00000547018 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 LRRC10BA6NIK2 292 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 FAM13AO94988 1023 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 CAP2P40123 477 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 CYP2J2P51589 502 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 SPA17Q15506 151 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 HAUS3Q68CZ6 603 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 LSM14BQ9BX40 385 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
SCAF11-209ENST00000547018 RCCD1A6NED2 376 aa14.07□□□□□ -0.16
SCAF11-209ENST00000547018 LRRC53A6NM62 1247 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms