RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SPICE1Q8N0Z3 855 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 CCDC63Q8NA47 563 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 ZIM3Q96PE6 472 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 CTAGE1Q96RT6 745 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 ANKIB1Q9P2G1 1089 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 ABCF2Q9UG63 623 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 NHSQ6T4R5 1651 aa8.65□□□□□ -1.02
UBR1-202ENST00000546274 A6NHS1 94 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 XBP1P17861 261 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.03
UBR1-202ENST00000546274 INF2Q27J81 1249 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 CACNA2D3Q8IZS8 1091 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 ATL2Q8NHH9 583 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 TSPAN18Q96SJ8 248 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 ABHD10Q9NUJ1 306 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 RHBDL2Q9NX52 303 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 SLC5A4Q9NY91 659 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.03
UBR1-202ENST00000546274 hCG_2014768A0A024R1R8 64 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 DDAH1O94760 285 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 ATP1A1P05023 1023 aaKnown RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 TUBP50607 506 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 AMPD2Q01433 879 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 MYBPC3Q14896 1274 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 CCDC70Q6NSX1 233 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 CATIPQ7Z7H3 387 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 C4orf32Q8N8J7 132 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 PRCCQ92733 491 aaPredicted RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 LZTS2Q9BRK4 669 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 DMGDHQ9UI17 866 aaKnown RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 RWDD2AQ9UIY3 292 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 SAR1BQ9Y6B6 198 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 CDK5RAP2Q96SN8 1893 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 BMP15O95972 392 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 ITPK1Q13572 414 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 PARP10Q53GL7 1025 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 CNGA4Q8IV77 575 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 FAM114A1Q8IWE2 563 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 SEC16BQ96JE7 1060 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 PREBQ9HCU5 417 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 GALNT8Q9NY28 637 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 STXBP3O00186 592 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 PARP1P09874 1014 aaKnown RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 BAG6P46379 1132 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 TCP11X2Q5H9J9 407 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 IRF2BP1Q8IU81 584 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 AENQ8WTP8 325 aaKnown RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
UBR1-202ENST00000546274 REXO2Q9Y3B8 237 aaKnown RBP8.64□□□□□ -1.03
UBR1-202ENST00000546274 CALM1P0DP23 149 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CALM2P0DP24 149 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CALM3P0DP25 149 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CFAP58Q5T655 872 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 KDM7AQ6ZMT4 941 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 PIK3AP1Q6ZUJ8 805 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 SDCCAG8Q86SQ7 713 aaPredicted RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 CCDC43Q96MW1 224 aaKnown RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 JADE2Q9NQC1 790 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 TTF2Q9UNY4 1162 aaKnown RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 NIP7Q9Y221 180 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBR1-202ENST00000546274 ZNF831Q5JPB2 1677 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 TARSL2A2RTX5 802 aaKnown RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 GMNCA6NCL1 334 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 KLRK1P26718 216 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 TMOD1P28289 359 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 PCK1P35558 622 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 COPB1P53618 953 aaKnown RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 SLMAPQ14BN4 828 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 PFKFB3Q16875 520 aaPredicted RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 FAM133BQ5BKY9 247 aaKnown RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 ANKRD20A2Q5SQ80 823 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 ANKRD20A1Q5TYW2 823 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 RNF220Q5VTB9 566 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 ANKRD20A3Q5VUR7 823 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 ERICH1Q86X53 443 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 CCDC170Q8IYT3 715 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
UBR1-202ENST00000546274 VPS16Q9H269 839 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 GDAQ9Y2T3 454 aa8.63□□□□□ -1.03
UBR1-202ENST00000546274 PHF20L1A8MW92 1017 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 USP17L12C9JPN9 530 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 USP17L21D6R901 530 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 PDE2AO00408 941 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 GTPBP6O43824 516 aaPredicted RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 ORC4O43929 436 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 LUC7L3O95232 432 aaKnown RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 PCP11498 1178 aaKnown RBP8.62□□□□□ -1.03
UBR1-202ENST00000546274 SCG2P13521 617 aa8.62□□□□□ -1.03
UBR1-202ENST00000546274 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms