RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ATP6V1G2O95670 118 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 KRT13P13646 458 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 ABCB4P21439 1286 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
PDZD4-209ENST00000544474 ANKRD40Q6AI12 368 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 PACSIN1Q9BY11 444 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 LMCD1Q9NZU5 365 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 C15orf41Q9Y2V0 281 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 PCNTO95613 3336 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
PDZD4-209ENST00000544474 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 H7C1D1 291 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 FAM107AO95990 144 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 YY1P25490 414 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 USP4Q13107 963 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 SLMAPQ14BN4 828 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 GKAP1Q5VSY0 366 aaPredicted RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 DAPK3O43293 454 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 RAD51CO43502 376 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 TRIM28Q13263 835 aaKnown RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 ALS2CLQ60I27 953 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 CCDC63Q8NA47 563 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 NUP58Q9BVL2 599 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 NIP7Q9Y221 180 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 SLIT3O75094 1523 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 GMNCA6NCL1 334 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 LGALS16A8MUM7 142 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 TRAF5O00463 557 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 ZNF658Q5TYW1 1059 aaPredicted RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 AENQ8WTP8 325 aaKnown RBP14.03□□□□□ -0.16
PDZD4-209ENST00000544474 PNMA2Q9UL42 364 aa14.03□□□□□ -0.16
PDZD4-209ENST00000544474 SPATA31A3Q5VYP0 1347 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 TCRBV5S4A2TA0A5A2 114 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 FOXO6A8MYZ6 492 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 EPB41P11171 864 aaKnown RBP14.02□□□□□ -0.16
PDZD4-209ENST00000544474 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.16
PDZD4-209ENST00000544474 SCTRP47872 440 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 DNM2P50570 870 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 ANKRD20A8PQ5CZ79 823 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 PTF1AQ7RTS3 328 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 ANKRD23Q86SG2 305 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 NLRP10Q86W26 655 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 PCDHGC5Q9Y5F6 944 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 TACC3Q9Y6A5 838 aa14.02□□□□□ -0.16
PDZD4-209ENST00000544474 MGRN1O60291 552 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ECEL1O95672 775 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 GNAT1P11488 350 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 FERP16591 822 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ABCD1P33897 745 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 PPP2R5BQ15173 497 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ZNF512BQ96KM6 892 aaPredicted RBP14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ATP6V1G3Q96LB4 118 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 PLA2G12BQ9BX93 195 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 FBXL5Q9UKA1 691 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ARFGEF2Q9Y6D5 1785 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 PDE8AO60658 829 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 KDM7AQ6ZMT4 941 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 GDAP1Q8TB36 358 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 ARHGAP20Q9P2F6 1191 aa14.02□□□□□ -0.17
PDZD4-209ENST00000544474 WDR17Q8IZU2 1322 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 KRT18P05783 430 aaKnown RBP14.01□□□□□ -0.17
PDZD4-209ENST00000544474 PYGBP11216 843 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 FLT3P36888 993 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 MAGEA8P43361 318 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 VPS41P49754 854 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 LRRC23Q53EV4 343 aaPredicted RBP14.01□□□□□ -0.17
PDZD4-209ENST00000544474 C6orf89Q6UWU4 347 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 IRF2BP1Q8IU81 584 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 EBF2Q9HAK2 575 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 ROR2Q01974 943 aaKnown RBP14.01□□□□□ -0.17
PDZD4-209ENST00000544474 ZNF211Q13398 564 aaPredicted RBP14.01□□□□□ -0.17
PDZD4-209ENST00000544474 PAPD7Q5XG87 772 aaKnown RBP14.01□□□□□ -0.17
PDZD4-209ENST00000544474 EPAS1Q99814 870 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 SPEF2Q9C093 1822 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
PDZD4-209ENST00000544474 A8MUI8 341 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 ARHGAP22Q7Z5H3 698 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 TMEM60Q9H2L4 133 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 TCP11L1Q9NUJ3 509 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 LRRC10BA6NIK2 292 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 USP17L12C9JPN9 530 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 USP17L21D6R901 530 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms